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04302015_21_scaffold_10_prodigal-single.1__X__X__00047
Bact-Vir04302015_21_scaffold_10_prodigal-single.1__X__X__00047
Identity
- Kingdom:
- phage
Quality
64.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-74
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.81 | 61.0 | 5.78e-01 | 89.1% | 67.9% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 49.0 | 3.17e-01 | 100.0% | 48.3% |
| 3h95A02 | 4.10.80.100 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.59 | 36.0 | 3.93e-01 | 95.7% | 90.0% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.59 | 47.0 | 4.50e-01 | 91.3% | 89.3% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.59 | 42.0 | 4.07e-01 | 82.6% | 80.7% |
| 1y89A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 46.0 | 2.99e-01 | 91.3% | 17.7% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.57 | 39.0 | 3.31e-01 | 71.7% | 59.0% |
| 5nslA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 45.0 | 2.66e-01 | 93.5% | 18.9% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.56 | 42.0 | 4.29e-01 | 87.0% | 84.8% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 43.0 | 3.98e-01 | 91.3% | 63.5% |
| 8hnzA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.56 | 45.0 | 2.70e-01 | 93.5% | 12.1% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 41.0 | 3.65e-01 | 89.1% | 72.7% |
| 3t5tB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 43.0 | 2.75e-01 | 97.8% | 47.0% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.53 | 35.0 | 3.32e-01 | 82.6% | 54.4% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 3.66e-01 | 89.1% | 67.1% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 40.0 | 3.77e-01 | 87.0% | 85.0% |
| 3lifA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 38.0 | 3.36e-01 | 91.3% | 60.0% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 39.0 | 2.88e-01 | 87.0% | 29.3% |
| 6l1kA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 42.0 | 2.87e-01 | 93.5% | 48.9% |
| 3pvlA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 39.0 | 3.48e-01 | 89.1% | 71.1% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.52 | 39.0 | 3.90e-01 | 89.1% | 88.2% |
| 1kvkA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.52 | 40.0 | 2.72e-01 | 97.8% | 43.5% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3604320 | 375.1.1.50 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_4 | 0.87 | 70.0 | 7.41e-01 | 87.0% | 100.0% |
| 3387951 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.85 | 67.0 | 7.09e-01 | 87.0% | 97.5% |
| 3343242 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 65.0 | 6.91e-01 | 89.1% | 97.5% |
| 3307036 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.84 | 70.0 | 6.81e-01 | 91.3% | 88.0% |
| 5040906 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 64.0 | 6.86e-01 | 84.8% | 100.0% |
| 3440950 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.83 | 63.0 | 6.72e-01 | 82.6% | 100.0% |
| 4944757 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 67.0 | 6.81e-01 | 91.3% | 97.8% |
| 5080678 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.80 | 67.0 | 6.30e-01 | 91.3% | 78.2% |
| 5046929 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 65.0 | 6.36e-01 | 89.1% | 82.0% |
| 5000687 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 65.0 | 6.02e-01 | 91.3% | 79.3% |
| 4582514 | 375.1.1.50 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_4 | 0.79 | 62.0 | 6.48e-01 | 87.0% | 100.0% |
| 3454406 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.78 | 67.0 | 6.55e-01 | 95.7% | 92.0% |
| 1933336 | 375.1.1.50 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_4 | 0.77 | 61.0 | 6.32e-01 | 89.1% | 100.0% |
| 4025629 | 375.3.1.1 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-DNL | 0.77 | 63.0 | 5.13e-01 | 91.3% | 65.9% |
| 3785389 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.76 | 62.0 | 5.89e-01 | 91.3% | 81.8% |
| 4968628 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 60.0 | 6.25e-01 | 87.0% | 100.0% |
| 3599921 | 375.3.1.0 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger | 0.74 | 64.0 | 5.73e-01 | 95.7% | 79.7% |
| 3497994 | 375.1.1.208 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-DNL | 0.74 | 63.0 | 6.20e-01 | 95.7% | 88.0% |
| 3785476 | 375.1.1.57 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Vps36-NZF-N | 0.74 | 60.0 | 6.06e-01 | 89.1% | 95.6% |
| 3922513 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 52.0 | 5.60e-01 | 82.6% | 100.0% |
| 3457574 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.73 | 61.0 | 5.48e-01 | 93.5% | 80.0% |
| 3419233 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 50.0 | 5.47e-01 | 80.4% | 100.0% |
| 4965882 | 375.1.1.344 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7836 | 0.69 | 54.0 | 5.20e-01 | 89.1% | 94.4% |
| 3401929 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 49.0 | 5.16e-01 | 82.6% | 95.0% |
| 4928216 | 375.1.4.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain | 0.65 | 46.0 | 4.98e-01 | 76.1% | 100.0% |
| 4929289 | 375.1.1.329 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TackOD1 | 0.64 | 49.0 | 4.35e-01 | 84.8% | 58.5% |
| 4011699 | 4224.1.1.0 ↗ | few secondary structure elements › CHY zinc finger › CHY zinc finger › CHY zinc finger | 0.63 | 44.0 | 4.11e-01 | 84.8% | 58.3% |
| 3320639 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.62 | 43.0 | 2.80e-01 | 91.3% | 15.5% |
| 3470470 | 2004.1.1.171 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Smg8_Smg9 | 0.62 | 50.0 | 3.12e-01 | 97.8% | 15.0% |
| 4927636 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 48.0 | 4.99e-01 | 87.0% | 100.0% |
| 3260588 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 42.0 | 4.16e-01 | 73.9% | 78.0% |
| 4065083 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.61 | 45.0 | 4.29e-01 | 82.6% | 85.5% |
| 4440301 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.59 | 43.0 | 4.19e-01 | 82.6% | 83.6% |
| 2573961 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 4.13e-01 | 73.9% | 77.1% |
| 3705148 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 43.0 | 4.37e-01 | 82.6% | 86.7% |
| 3412686 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.57 | 43.0 | 3.23e-01 | 93.5% | 56.0% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 44.0 | 3.94e-01 | 89.1% | 74.3% |
| 3998685 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.56 | 40.0 | 3.50e-01 | 84.8% | 100.0% |
| 4933213 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.56 | 45.0 | 4.05e-01 | 95.7% | 68.6% |
| 3805018 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.56 | 42.0 | 2.66e-01 | 95.7% | 21.5% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 44.0 | 3.71e-01 | 91.3% | 58.8% |
| 3501741 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.55 | 43.0 | 4.03e-01 | 89.1% | 80.0% |
| 4948153 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 43.0 | 3.93e-01 | 93.5% | 62.9% |
| 5044742 | 375.1.1.95 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_13 | 0.54 | 42.0 | 3.96e-01 | 97.8% | 92.3% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 42.0 | 3.51e-01 | 89.1% | 58.8% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 41.0 | 3.46e-01 | 89.1% | 54.1% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 41.0 | 3.39e-01 | 89.1% | 53.3% |
| 3598956 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 40.0 | 3.37e-01 | 84.8% | 62.5% |
| 3218417 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 38.0 | 3.27e-01 | 84.8% | 52.9% |
| 3406650 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.52 | 40.0 | 3.27e-01 | 93.5% | 77.1% |
| 5024386 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.52 | 41.0 | 3.41e-01 | 100.0% | 95.0% |
| 3088296 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.51 | 43.0 | 2.88e-01 | 100.0% | 35.9% |