←Back to structures
04302015_21_scaffold_10_prodigal-single.1__X__X__00083
Bact-Vir04302015_21_scaffold_10_prodigal-single.1__X__X__00083
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-82
Domain cluster:
rep: IMGVR_UViG_3300001682_000662-3300001682-SAHD_1000721816__D1-69
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u2kA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.67 | 47.0 | 3.65e-01 | 73.8% | 80.5% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.63 | 49.0 | 3.76e-01 | 85.2% | 77.9% |
| 4fflA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.63 | 52.0 | 3.53e-01 | 98.4% | 76.4% |
| 5k19A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 53.0 | 3.26e-01 | 100.0% | 36.7% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.60 | 47.0 | 4.04e-01 | 85.2% | 82.7% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 41.0 | 3.42e-01 | 73.8% | 72.2% |
| 3iwaA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 47.0 | 3.23e-01 | 90.2% | 50.6% |
| 2w42B02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 43.0 | 2.97e-01 | 78.7% | 65.8% |
| 1xdiA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.59 | 49.0 | 4.01e-01 | 96.7% | 87.7% |
| 1nnvA01 | 3.10.450.140 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative | 0.58 | 40.0 | 3.49e-01 | 73.8% | 86.0% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 35.0 | 3.52e-01 | 88.5% | 56.2% |
| 2hljA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 45.0 | 3.62e-01 | 90.2% | 69.3% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.57 | 35.0 | 3.89e-01 | 90.2% | 79.2% |
| 3nqzA01 | 3.10.450.490 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 45.0 | 4.02e-01 | 88.5% | 86.8% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.57 | 44.0 | 3.31e-01 | 88.5% | 94.7% |
| 6i18A04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 43.0 | 3.59e-01 | 83.6% | 87.9% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 3.73e-01 | 82.0% | 100.0% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.55 | 41.0 | 3.41e-01 | 80.3% | 79.6% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 38.0 | 3.21e-01 | 73.8% | 87.1% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.67e-01 | 85.2% | 18.0% |
| 2b39A03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 3.47e-01 | 88.5% | 93.6% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.83e-01 | 95.1% | 17.7% |
| 2gnxA02 | 3.30.450.240 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 38.0 | 3.24e-01 | 77.0% | 77.1% |
| 3kljA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.53 | 40.0 | 3.70e-01 | 83.6% | 67.5% |
| 4ghnA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.53 | 37.0 | 3.19e-01 | 75.4% | 97.1% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 38.0 | 3.24e-01 | 78.7% | 73.6% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 33.0 | 3.63e-01 | 78.7% | 83.0% |
| 1nrkA01 | 3.30.70.1630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 44.0 | 3.89e-01 | 100.0% | 78.4% |
| 3oz2A02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.52 | 38.0 | 2.96e-01 | 82.0% | 38.1% |
| 7yh1A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.52 | 40.0 | 3.36e-01 | 86.9% | 84.2% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.52 | 42.0 | 3.39e-01 | 98.4% | 75.9% |
| 6y2kA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 38.0 | 4.11e-01 | 86.9% | 96.0% |
| 2ymsB00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 38.0 | 3.63e-01 | 83.6% | 70.3% |
| 2ymsA00 | 2.40.128.630 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 38.0 | 3.14e-01 | 85.2% | 42.7% |
| 3ttyA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 39.0 | 3.91e-01 | 85.2% | 96.8% |
| 1h4rA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 35.0 | 3.16e-01 | 75.4% | 78.0% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5012339 | 244.2.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 | 0.87 | 76.0 | 7.70e-01 | 93.4% | 96.7% |
| 5074846 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.86 | 75.0 | 7.56e-01 | 95.1% | 96.7% |
| 4999513 | 244.2.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 | 0.85 | 66.0 | 7.27e-01 | 82.0% | 100.0% |
| 4966292 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.84 | 72.0 | 7.03e-01 | 91.8% | 86.2% |
| 5027663 | 244.2.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 | 0.83 | 74.0 | 7.30e-01 | 96.7% | 90.8% |
| 4967553 | 244.2.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 | 0.83 | 73.0 | 7.44e-01 | 95.1% | 96.7% |
| 4955532 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.77 | 61.0 | 5.63e-01 | 88.5% | 71.2% |
| 3536857 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.74 | 61.0 | 4.47e-01 | 91.8% | 68.5% |
| 6726 | 244.2.1.9 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › PF1197-like_C | 0.73 | 53.0 | 5.46e-01 | 90.2% | 82.5% |
| 4562142 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.65 | 46.0 | 2.86e-01 | 73.8% | 28.9% |
| 3369938 | 244.2.1.8 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › MDHAR3-like_C | 0.64 | 49.0 | 4.19e-01 | 85.2% | 57.3% |
| 3391867 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 44.0 | 3.45e-01 | 73.8% | 65.2% |
| None | — | 0.61 | 49.0 | 3.74e-01 | 90.2% | 61.3% | |
| 3388425 | 319.3.1.0 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ | 0.61 | 52.0 | 4.43e-01 | 95.1% | 74.0% |
| 4424609 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.61 | 42.0 | 4.40e-01 | 83.6% | 83.0% |
| 4938313 | 244.2.1.7 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C | 0.60 | 43.0 | 4.07e-01 | 77.0% | 65.3% |
| 4034422 | 3425.2.1.3 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › PF29809 | 0.60 | 49.0 | 3.35e-01 | 93.4% | 42.0% |
| 3587716 | 3425.2.1.2 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › YycI | 0.59 | 48.0 | 3.25e-01 | 90.2% | 45.9% |
| 3934850 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 42.0 | 3.42e-01 | 75.4% | 66.7% |
| 3898218 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.59 | 47.0 | 3.39e-01 | 86.9% | 57.7% |
| 3450701 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.57 | 49.0 | 2.99e-01 | 100.0% | 72.6% |
| 3486056 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 47.0 | 3.60e-01 | 95.1% | 74.2% |
| 3235400 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.57 | 39.0 | 3.47e-01 | 72.1% | 80.9% |
| 4099278 | 244.2.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Reductase_C | 0.57 | 44.0 | 4.03e-01 | 88.5% | 63.5% |
| 3188595 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.56 | 46.0 | 3.30e-01 | 90.2% | 65.0% |
| 3262178 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.56 | 44.0 | 2.57e-01 | 90.2% | 10.6% |
| 3923801 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 38.0 | 3.38e-01 | 73.8% | 83.2% |
| 5000843 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 42.0 | 3.50e-01 | 85.2% | 83.5% |
| 4027513 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.55 | 41.0 | 3.36e-01 | 80.3% | 73.0% |
| 4518168 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.54 | 46.0 | 2.96e-01 | 100.0% | 79.4% |
| 3627817 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.54 | 41.0 | 2.71e-01 | 86.9% | 38.6% |
| 3922389 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 41.0 | 3.33e-01 | 86.9% | 68.5% |
| 3988064 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 37.0 | 3.62e-01 | 73.8% | 84.3% |
| 3900377 | 220.1.1.41 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sharpin_PH | 0.53 | 40.0 | 3.21e-01 | 82.0% | 64.0% |
| 1140051 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.53 | 33.0 | 3.59e-01 | 78.7% | 79.6% |
| 3257362 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 40.0 | 3.42e-01 | 86.9% | 83.6% |
| 4030396 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 40.0 | 3.21e-01 | 85.2% | 82.3% |
| 4984182 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.52 | 39.0 | 3.62e-01 | 86.9% | 62.4% |
| 3623755 | 223.2.1.16 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 | 0.52 | 39.0 | 3.28e-01 | 85.2% | 80.9% |
| 4200316 | 220.1.1.191 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28624 | 0.52 | 41.0 | 3.15e-01 | 90.2% | 84.5% |
| 4028315 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.51 | 41.0 | 3.52e-01 | 93.4% | 95.5% |
| 2641000 | 12.1.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_42C | 0.51 | 38.0 | 3.99e-01 | 86.9% | 88.9% |
| 328471 | 220.1.1.63 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NF1 | 0.51 | 39.0 | 3.24e-01 | 86.9% | 78.6% |
| 3823073 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.51 | 40.0 | 2.62e-01 | 95.1% | 19.7% |
| 3262565 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.65e-01 | 93.4% | 64.7% |
| 3484018 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 41.0 | 2.56e-01 | 93.4% | 25.7% |
| 3697109 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.50 | 40.0 | 2.44e-01 | 95.1% | 24.9% |
| 4026603 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.50 | 37.0 | 3.16e-01 | 96.7% | 47.6% |