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04302015_21_scaffold_10_prodigal-single.1__X__X__00095
Bact-Vir04302015_21_scaffold_10_prodigal-single.1__X__X__00095
Identity
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-51
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1srrC00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.84 | 71.0 | 5.13e-01 | 93.5% | 35.5% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.83 | 73.0 | 4.96e-01 | 100.0% | 28.4% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.78 | 66.0 | 5.02e-01 | 100.0% | 40.9% |
| 2aeuA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.77 | 59.0 | 3.83e-01 | 91.3% | 18.4% |
| 1jvnA01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.77 | 62.0 | 3.82e-01 | 87.0% | 16.7% |
| 3c97A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.77 | 63.0 | 5.90e-01 | 93.5% | 74.1% |
| 1dc7A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.75 | 62.0 | 4.55e-01 | 95.7% | 34.7% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.75 | 63.0 | 4.55e-01 | 100.0% | 35.2% |
| 3f6cA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 58.0 | 4.31e-01 | 93.5% | 34.1% |
| 5zctA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.72 | 59.0 | 4.47e-01 | 93.5% | 49.1% |
| 4gudB00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.72 | 55.0 | 3.54e-01 | 87.0% | 18.9% |
| 3mw8A01 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 57.0 | 4.32e-01 | 93.5% | 41.0% |
| 1gpmA01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.71 | 59.0 | 3.86e-01 | 93.5% | 21.7% |
| 3bl4A02 | 3.40.970.30 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › yp_829618.1 like domains | 0.70 | 56.0 | 5.54e-01 | 93.5% | 91.7% |
| 2q5cA02 | 3.40.50.10660 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PrpR receptor domain-like | 0.69 | 55.0 | 4.55e-01 | 93.5% | 53.3% |
| 1p5jA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 57.0 | 4.61e-01 | 100.0% | 46.9% |
| 3imkA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 56.0 | 3.98e-01 | 100.0% | 33.5% |
| 3l9wA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 54.0 | 3.71e-01 | 91.3% | 39.3% |
| 1uc8A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 53.0 | 4.25e-01 | 93.5% | 47.6% |
| 4qqrB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 54.0 | 3.38e-01 | 93.5% | 17.5% |
| 3ngxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 54.0 | 4.00e-01 | 93.5% | 34.4% |
| 4au2B01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.65 | 53.0 | 3.53e-01 | 100.0% | 22.6% |
| 4id9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 50.0 | 3.31e-01 | 93.5% | 27.5% |
| 2duwA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 50.0 | 3.67e-01 | 93.5% | 40.9% |
| 1y6zA02 | 3.40.50.11260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 53.0 | 4.44e-01 | 100.0% | 60.5% |
| 3u62A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 47.0 | 3.54e-01 | 87.0% | 46.1% |
| 1l0bA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.62 | 47.0 | 4.05e-01 | 100.0% | 50.6% |
| 1jrrA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.62 | 49.0 | 3.31e-01 | 100.0% | 23.1% |
| 4cjxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 50.0 | 3.62e-01 | 93.5% | 32.1% |
| 4eqbA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 49.0 | 3.44e-01 | 93.5% | 69.1% |
| 6n2nC03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 48.0 | 3.80e-01 | 93.5% | 44.1% |
| 3fwzA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 45.0 | 3.32e-01 | 95.7% | 27.9% |
| 1xriA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.60 | 47.0 | 3.52e-01 | 100.0% | 36.4% |
| 2nteA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.60 | 47.0 | 3.79e-01 | 100.0% | 41.3% |
| 4h5gA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 46.0 | 3.68e-01 | 93.5% | 42.1% |
| 1a99A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 48.0 | 3.31e-01 | 93.5% | 69.5% |
| 4z9nA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 48.0 | 3.73e-01 | 93.5% | 42.7% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.57 | 39.0 | 3.21e-01 | 100.0% | 39.8% |
| 4lubB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 44.0 | 3.52e-01 | 93.5% | 42.0% |
| 2v25A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 44.0 | 3.50e-01 | 93.5% | 43.6% |
| 5je6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 43.0 | 2.88e-01 | 100.0% | 30.5% |
| 1oe8A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 41.0 | 3.51e-01 | 84.8% | 68.8% |
| 2f5xA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 40.0 | 3.02e-01 | 93.5% | 36.3% |
| 5m1pB00 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.50 | 38.0 | 2.75e-01 | 100.0% | 51.9% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3728000 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.80 | 67.0 | 4.67e-01 | 100.0% | 28.7% |
| 4327073 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.79 | 66.0 | 4.73e-01 | 95.7% | 33.1% |
| 4927745 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.78 | 66.0 | 4.90e-01 | 100.0% | 36.8% |
| 4177178 | 2007.1.3.59 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Peptidase_U57 | 0.77 | 65.0 | 4.19e-01 | 100.0% | 53.0% |
| 4580439 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.76 | 59.0 | 3.89e-01 | 91.3% | 20.5% |
| 109306 | 7538.1.1.1 ↗ | a/b three-layered sandwiches › Hypothetical protein MT938 (MTH938) › Hypothetical protein MT938 (MTH938) › Hypothetical protein MT938 (MTH938) › DUF498 | 0.76 | 64.0 | 4.82e-01 | 100.0% | 39.5% |
| 4153559 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.76 | 62.0 | 4.66e-01 | 100.0% | 36.7% |
| 3594868 | 2007.1.10.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › PrpR receptor domain-like | 0.74 | 62.0 | 5.21e-01 | 100.0% | 54.1% |
| 3279581 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.73 | 59.0 | 3.80e-01 | 93.5% | 21.3% |
| 3981116 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.72 | 61.0 | 4.30e-01 | 100.0% | 30.1% |
| 3470386 | 2007.1.1.36 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › HSNSD_N | 0.71 | 58.0 | 3.76e-01 | 100.0% | 21.7% |
| 4605776 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.70 | 56.0 | 4.39e-01 | 100.0% | 40.0% |
| 4642945 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.70 | 60.0 | 4.35e-01 | 97.8% | 36.9% |
| 4203176 | 7502.1.1.6 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HisZ_C | 0.69 | 55.0 | 4.96e-01 | 93.5% | 65.1% |
| 4194688 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.68 | 55.0 | 4.25e-01 | 100.0% | 39.1% |
| 3315238 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.67 | 53.0 | 3.27e-01 | 93.5% | 15.7% |
| 4246647 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.66 | 54.0 | 4.03e-01 | 97.8% | 38.5% |
| 5078496 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.66 | 51.0 | 3.82e-01 | 93.5% | 35.6% |
| 3593334 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.66 | 57.0 | 3.90e-01 | 100.0% | 38.8% |
| 4012789 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.66 | 52.0 | 3.24e-01 | 93.5% | 15.9% |
| 4569789 | 7502.1.1.6 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HisZ_C | 0.66 | 51.0 | 4.90e-01 | 93.5% | 74.5% |
| 3998328 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.63 | 49.0 | 3.09e-01 | 93.5% | 16.9% |
| 4931119 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.62 | 52.0 | 3.49e-01 | 97.8% | 98.5% |
| 5055352 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.62 | 49.0 | 3.64e-01 | 93.5% | 60.0% |
| 4834443 | 7523.1.1.28 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_8 | 0.62 | 47.0 | 3.64e-01 | 87.0% | 43.0% |
| 4311271 | 7502.1.1.6 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HisZ_C | 0.62 | 49.0 | 4.58e-01 | 93.5% | 70.0% |
| 3470214 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.62 | 50.0 | 3.37e-01 | 100.0% | 22.3% |
| 3973203 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.61 | 49.0 | 3.88e-01 | 93.5% | 42.0% |
| 4326976 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.61 | 47.0 | 4.53e-01 | 84.8% | 72.2% |
| 2718131 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.61 | 47.0 | 3.66e-01 | 87.0% | 45.8% |
| 1522762 | 7523.1.1.8 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 | 0.61 | 46.0 | 3.60e-01 | 87.0% | 45.4% |
| 3971157 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.60 | 48.0 | 3.69e-01 | 93.5% | 40.0% |
| 3038179 | 7523.1.1.8 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 | 0.59 | 48.0 | 3.82e-01 | 97.8% | 43.4% |
| 1527402 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.56 | 44.0 | 3.71e-01 | 93.5% | 50.0% |
| 3609439 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.55 | 44.0 | 3.11e-01 | 100.0% | 42.8% |
| 4624477 | 2003.1.1.38 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › THF_DHG_CYH_C | 0.54 | 42.0 | 3.02e-01 | 91.3% | 27.5% |
| 1763074 | 7523.1.1.17 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC | 0.54 | 44.0 | 3.47e-01 | 100.0% | 49.1% |
| 4940953 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.52 | 39.0 | 3.29e-01 | 100.0% | 41.8% |