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04302015_21_scaffold_10_prodigal-single.1__X__X__00201
Bact-Vir04302015_21_scaffold_10_prodigal-single.1__X__X__00201
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-60
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bo7A00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.72 | 61.0 | 3.75e-01 | 100.0% | 20.9% |
| 5nl9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 51.0 | 4.31e-01 | 77.1% | 83.3% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.71 | 59.0 | 4.84e-01 | 100.0% | 81.4% |
| 2nyvA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 52.0 | 4.81e-01 | 100.0% | 98.4% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.60 | 41.0 | 3.60e-01 | 77.1% | 57.0% |
| 3onkA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 41.0 | 3.10e-01 | 79.2% | 56.9% |
| 3hjlA03 | 1.20.5.2020 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 34.0 | 3.62e-01 | 91.7% | 65.9% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 41.0 | 3.77e-01 | 79.2% | 59.7% |
| 1dj2A02 | 1.10.300.10 | Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 | 0.57 | 47.0 | 3.86e-01 | 100.0% | 75.8% |
| 5ibkB00 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.56 | 33.0 | 3.40e-01 | 100.0% | 58.7% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.65e-01 | 89.6% | 100.0% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 3.52e-01 | 89.6% | 54.7% |
| 2cq8A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.53 | 42.0 | 3.72e-01 | 95.8% | 60.5% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.51 | 36.0 | 3.53e-01 | 81.2% | 76.4% |
| 4gmqA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.50 | 39.0 | 3.40e-01 | 100.0% | 56.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3794285 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.60 | 49.0 | 4.40e-01 | 100.0% | 73.3% |
| 3212831 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.58 | 37.0 | 2.52e-01 | 97.9% | 16.8% |
| 5013384 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.58 | 39.0 | 2.88e-01 | 87.5% | 23.3% |
| 5018166 | 2004.1.1.210 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ERCC3_RAD25_C | 0.56 | 42.0 | 2.81e-01 | 83.3% | 20.0% |
| 3731818 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.54 | 37.0 | 2.24e-01 | 72.9% | 29.6% |
| 3973765 | 564.1.1.3 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › DUF4880 | 0.53 | 37.0 | 3.52e-01 | 75.0% | 61.7% |
| 3967741 | 564.1.1.3 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › DUF4880 | 0.52 | 37.0 | 3.50e-01 | 72.9% | 60.0% |
| 3972460 | 564.1.1.3 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › DUF4880 | 0.52 | 39.0 | 3.95e-01 | 83.3% | 82.0% |
| 3679006 | 1117.1.1.1 ↗ | alpha arrays › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › EPL1 | 0.51 | 43.0 | 3.08e-01 | 100.0% | 47.9% |
| 1826901 | 604.35.1.1 ↗ | alpha bundles › Spectrin repeat-like › Organelle protein MG491 central domain › Organelle protein MG491 central domain › MG491_central | 0.51 | 39.0 | 2.77e-01 | 83.3% | 76.4% |