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04302015_21_scaffold_10_prodigal-single.1__X__X__00258
Bact-Vir04302015_21_scaffold_10_prodigal-single.1__X__X__00258
Identity
- Kingdom:
- phage
Quality
68.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-153
D2
high
residues 339-444
Domain cluster:
rep: js4906-29-5_S40_scaffold_13_prodigal-single.1__X__X__00046__D3-97
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wfxA02 | 3.20.170.30 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › | 0.85 | 67.0 | 7.30e-01 | 98.1% | 96.7% |
| 2o0pA00 | 3.20.170.20 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Protein of unknown function DUF952 | 0.76 | 65.0 | 6.35e-01 | 99.1% | 85.1% |
| 2x5yA00 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.73 | 68.0 | 5.72e-01 | 100.0% | 64.9% |
| 1htlA00 | 3.90.210.10 | Alpha Beta › Alpha-Beta Complex › Heat-Labile Enterotoxin; Chain A › Heat-Labile Enterotoxin, subunit A | 0.72 | 66.0 | 5.39e-01 | 98.1% | 68.1% |
| 2rf5A00 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.70 | 64.0 | 5.12e-01 | 100.0% | 60.4% |
| 1gs0A02 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.68 | 63.0 | 4.92e-01 | 100.0% | 70.7% |
| 4eyyQ02 | 3.20.170.50 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Dot/Icm secretion system IcmQ, C-terminal domain | 0.61 | 52.0 | 5.09e-01 | 99.1% | 86.0% |
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.59 | 39.0 | 3.89e-01 | 100.0% | 64.8% |
| 1nh8A03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 28.0 | 3.47e-01 | 91.5% | 80.6% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3106804 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.84 | 68.0 | 6.95e-01 | 100.0% | 86.4% |
| 5077692 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.84 | 71.0 | 7.13e-01 | 100.0% | 88.6% |
| 4296568 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.84 | 67.0 | 7.09e-01 | 100.0% | 92.6% |
| 4546240 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.82 | 65.0 | 7.06e-01 | 99.1% | 96.7% |
| 4622968 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.82 | 64.0 | 6.92e-01 | 98.1% | 94.4% |
| 4008473 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.82 | 64.0 | 6.61e-01 | 98.1% | 85.9% |
| 4125268 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.82 | 65.0 | 7.02e-01 | 99.1% | 96.7% |
| 4679144 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.81 | 65.0 | 6.87e-01 | 100.0% | 92.6% |
| 4303698 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.81 | 64.0 | 6.80e-01 | 99.1% | 92.6% |
| 5060086 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.80 | 65.0 | 6.82e-01 | 100.0% | 93.7% |
| 4994805 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.79 | 64.0 | 6.57e-01 | 100.0% | 88.3% |
| 4013919 | 237.1.1.9 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF952 | 0.73 | 62.0 | 6.21e-01 | 100.0% | 88.2% |
| 3196342 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.73 | 65.0 | 5.44e-01 | 100.0% | 58.0% |
| 3724972 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.71 | 65.0 | 4.78e-01 | 100.0% | 39.2% |
| 4937896 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.68 | 57.0 | 5.92e-01 | 100.0% | 97.0% |
| 4482243 | 237.1.1.11 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RES | 0.68 | 61.0 | 5.36e-01 | 99.1% | 93.5% |
| 3059252 | 237.1.1.11 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RES | 0.67 | 61.0 | 5.33e-01 | 99.1% | 94.9% |
| 3597208 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.66 | 57.0 | 4.71e-01 | 100.0% | 54.4% |
| 3602129 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.66 | 60.0 | 5.18e-01 | 100.0% | 87.1% |
| 4016125 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.64 | 60.0 | 5.74e-01 | 100.0% | 88.3% |
| 3360549 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.62 | 56.0 | 5.55e-01 | 98.1% | 93.6% |
D3
medium
residues 176-257
D4
medium
residues 258-312
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e7uA05 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.62 | 44.0 | 3.08e-01 | 76.4% | 31.9% |
| 4ex8A00 | 3.40.1790.10 | Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain | 0.57 | 41.0 | 2.60e-01 | 78.2% | 52.2% |
| 2oqtD00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.55 | 40.0 | 2.96e-01 | 80.0% | 97.4% |
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.54 | 41.0 | 4.18e-01 | 85.5% | 85.5% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.53 | 37.0 | 2.61e-01 | 76.4% | 41.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3689931 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.61 | 50.0 | 4.83e-01 | 94.5% | 80.0% |
| 4290005 | 3949.1.1.0 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain | 0.58 | 44.0 | 4.44e-01 | 87.3% | 89.1% |
| 4932863 | 101.1.2.947 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27234 | 0.55 | 36.0 | 3.15e-01 | 80.0% | 45.0% |