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04302015_21_scaffold_10_prodigal-single.1__X__X__00308

Bact-Vir

04302015_21_scaffold_10_prodigal-single.1__X__X__00308

Identity

Kingdom:
phage

Quality

61.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-125
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k5tA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 46.0 4.13e-01 100.0% 50.8%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.87e-01 94.4% 86.3%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.95e-01 73.0% 98.6%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.62e-01 73.0% 87.2%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 5.04e-01 92.1% 97.3%
1cm0A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 50.0 4.10e-01 100.0% 50.0%
4qc6A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 50.0 3.96e-01 100.0% 46.4%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 38.0 4.42e-01 93.3% 100.0%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.24e-01 92.1% 78.2%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.91e-01 84.3% 59.7%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 47.0 3.15e-01 95.5% 24.8%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 3.76e-01 88.8% 51.3%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 4.54e-01 100.0% 89.0%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 4.33e-01 94.4% 86.9%
2e9yB00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.54 46.0 3.27e-01 98.9% 98.1%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 4.34e-01 94.4% 87.2%
4bgdA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.97e-01 77.5% 100.0%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.53 46.0 4.12e-01 92.1% 82.5%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3515490 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 47.0 5.11e-01 71.9% 97.3%
None — 0.66 44.0 5.12e-01 93.3% 98.4%
5074567 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 46.0 4.12e-01 73.0% 56.0%
3387423 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.64 47.0 3.81e-01 100.0% 41.2%
3905735 101.1.2.94 ↗ alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.64 44.0 4.53e-01 71.9% 91.8%
4996074 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 4.53e-01 91.0% 81.2%
4365970 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.61 42.0 3.98e-01 71.9% 73.6%
5050212 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 4.14e-01 93.3% 68.4%
4030557 101.1.2.281 ↗ alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.60 39.0 3.39e-01 74.2% 42.1%
3498206 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 39.0 4.38e-01 92.1% 90.8%
3966140 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.59 46.0 4.93e-01 95.5% 98.7%
3289632 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 39.0 4.30e-01 74.2% 93.8%
3590981 101.1.2.142 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.56 40.0 4.26e-01 93.3% 86.1%
4362777 101.1.2.5 ↗ alpha arrays › HTH › HTH › winged helix domain › Crp 0.55 42.0 4.08e-01 93.3% 74.5%
5036096 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 41.0 3.84e-01 100.0% 64.5%
3597632 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 39.0 3.64e-01 76.4% 76.4%
3178978 101.1.2.178 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.53 45.0 4.00e-01 94.4% 88.5%
3626211 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 4.34e-01 92.1% 87.4%
3743748 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 34.0 3.46e-01 95.5% 67.8%
3622447 2004.1.1.560 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_4, AAA_34 0.50 42.0 2.56e-01 97.8% 41.1%