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04302015_21_scaffold_10_prodigal-single.1__X__X__00323
Bact-Vir04302015_21_scaffold_10_prodigal-single.1__X__X__00323
Identity
- Kingdom:
- phage
Quality
93.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 37-115
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2petA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.80 | 38.0 | 3.31e-01 | 98.7% | 32.2% |
| 4mz2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 36.0 | 3.20e-01 | 97.5% | 34.2% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 40.0 | 3.25e-01 | 98.7% | 33.1% |
| 4hadB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.66 | 34.0 | 2.52e-01 | 100.0% | 20.0% |
| 4dolA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.63 | 35.0 | 2.84e-01 | 97.5% | 26.9% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 34.0 | 3.42e-01 | 100.0% | 54.3% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.58 | 32.0 | 3.62e-01 | 98.7% | 71.9% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.54 | 35.0 | 2.85e-01 | 100.0% | 34.4% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.54 | 49.0 | 3.92e-01 | 98.7% | 88.6% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.51 | 26.0 | 2.47e-01 | 100.0% | 34.3% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.50 | 33.0 | 3.34e-01 | 96.2% | 65.1% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3515806 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.77 | 41.0 | 3.33e-01 | 100.0% | 31.1% |
| 4936480 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.76 | 41.0 | 3.08e-01 | 98.7% | 24.0% |
| 3069457 | 1053.1.1.0 ↗ | beta barrels › Factor H-binding protein (fHbp) N-terminal beta-barrel domain › Factor H-binding protein (fHbp) N-terminal beta-barrel domain › Factor H-binding protein (fHbp) N-terminal beta-barrel domain | 0.76 | 42.0 | 4.85e-01 | 97.5% | 75.4% |
| 4940380 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.72 | 42.0 | 2.98e-01 | 98.7% | 20.5% |
| 5072937 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.72 | 39.0 | 3.01e-01 | 98.7% | 24.7% |
| 5018285 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.70 | 39.0 | 3.47e-01 | 98.7% | 39.1% |
| 3969288 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.70 | 38.0 | 2.93e-01 | 98.7% | 25.5% |
| 4010148 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.69 | 38.0 | 2.87e-01 | 98.7% | 23.3% |
| 3281255 | 101.1.2.742 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7782 | 0.68 | 34.0 | 2.96e-01 | 96.2% | 30.8% |
| 3951613 | 2484.1.1.73 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Rv2179c-like | 0.68 | 35.0 | 2.72e-01 | 100.0% | 23.0% |
| 3950901 | 2484.1.1.73 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Rv2179c-like | 0.67 | 35.0 | 2.68e-01 | 100.0% | 22.4% |
| 5019486 | 5090.1.1.6 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer | 0.66 | 38.0 | 3.35e-01 | 97.5% | 36.7% |
| 163462 | 2008.1.1.63 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MvaI_BcnI | 0.66 | 56.0 | 3.97e-01 | 94.9% | 35.4% |
| 4002242 | 213.1.1.81 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF7596 | 0.64 | 38.0 | 3.22e-01 | 98.7% | 35.9% |
| 5061151 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.63 | 35.0 | 2.91e-01 | 98.7% | 30.0% |
| 3916175 | 3369.1.1.0 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 | 0.62 | 39.0 | 3.39e-01 | 100.0% | 42.5% |
| 5053966 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 33.0 | 3.25e-01 | 97.5% | 50.6% |
| 3198610 | 206.1.1.73 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, APH | 0.57 | 40.0 | 2.88e-01 | 74.7% | 82.0% |
| 4009489 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.55 | 49.0 | 3.93e-01 | 98.7% | 86.5% |
| 3394530 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.55 | 41.0 | 3.31e-01 | 81.0% | 85.0% |
| 4398059 | 813.1.1.1 ↗ | a+b two layers › Chalcone isomerase › Chalcone isomerase › Chalcone isomerase › Chalcone | 0.55 | 48.0 | 3.52e-01 | 100.0% | 63.6% |
| 3222820 | 519.1.1.1 ↗ | a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS | 0.53 | 42.0 | 3.85e-01 | 88.6% | 80.6% |
| 3510076 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.53 | 36.0 | 2.41e-01 | 70.9% | 56.5% |
| 3516392 | 519.1.1.1 ↗ | a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS | 0.52 | 44.0 | 3.97e-01 | 97.5% | 73.0% |
| 3286033 | 11.1.6.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain | 0.51 | 41.0 | 3.21e-01 | 84.8% | 83.7% |
| 3627056 | 519.1.1.1 ↗ | a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS | 0.51 | 42.0 | 3.86e-01 | 94.9% | 77.3% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.51 | 30.0 | 2.99e-01 | 92.4% | 52.3% |