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04302015_21_scaffold_10_prodigal-single.1__X__X__00330

Bact-Vir

04302015_21_scaffold_10_prodigal-single.1__X__X__00330

Identity

Kingdom:
phage

Quality

39.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 118-199
PDB
Domain cluster: representative
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wyhA05 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 64.0 5.38e-01 100.0% 83.6%
3esmA00 2.60.40.2230 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein YcnI-like PF07987, DUF1775 0.70 59.0 4.94e-01 100.0% 54.3%
3lvtA03 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 62.0 5.32e-01 100.0% 80.6%
3kp0A03 3.30.30.60 Alpha Beta › 2-Layer Sandwich › Defensin A-like › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain 0.68 46.0 5.05e-01 70.7% 94.0%
2pn5A10 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.68 55.0 4.60e-01 100.0% 50.7%
2blfA02 2.60.40.650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 58.0 5.22e-01 100.0% 70.2%
4nehA05 2.60.40.1530 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 0.66 59.0 4.60e-01 100.0% 55.6%
4kq7A02 2.60.120.1390 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 0.66 58.0 4.35e-01 100.0% 59.7%
6sl4A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.64 56.0 4.67e-01 100.0% 65.3%
4b96A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.64 55.0 4.62e-01 100.0% 57.6%
1tulA00 2.70.40.20 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Baculovirus telokin-like protein 20 0.64 54.0 5.11e-01 100.0% 77.5%
1cl7I00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 46.0 4.65e-01 81.7% 79.3%
4b97A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.62 54.0 4.49e-01 100.0% 58.9%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.62 55.0 5.01e-01 100.0% 93.6%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.62 56.0 4.53e-01 100.0% 53.2%
2l8aA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.61 53.0 4.46e-01 100.0% 58.4%
4czwA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 47.0 2.98e-01 81.7% 42.3%
2okxA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 52.0 4.10e-01 100.0% 54.2%
4ofdB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 49.0 4.76e-01 98.8% 80.0%
7uzsX04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 51.0 4.94e-01 97.6% 83.3%
4gafB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 52.0 4.78e-01 100.0% 80.0%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 51.0 4.71e-01 100.0% 79.3%
3gz7B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 46.0 4.34e-01 82.9% 82.7%
3gbnL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 29.0 3.76e-01 78.0% 87.8%
1es0A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.72e-01 98.8% 78.8%
1ao7B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.72e-01 98.8% 79.0%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 4.68e-01 98.8% 81.1%
2e9wA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 49.0 4.68e-01 98.8% 78.4%
2y3uA02 3.30.980.50 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › 0.58 46.0 4.16e-01 85.4% 81.4%
4a5wA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 50.0 4.65e-01 98.8% 87.6%
2je8B05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 4.31e-01 98.8% 77.5%
4g2aA01 2.60.40.3680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 50.0 3.69e-01 100.0% 65.4%
4r6uA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 4.57e-01 98.8% 77.7%
5lf5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 4.65e-01 97.6% 83.9%
2ccvA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 49.0 4.65e-01 100.0% 96.0%
7zqiA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 45.0 4.53e-01 98.8% 87.2%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 48.0 4.52e-01 98.8% 79.8%
1cqkA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 4.52e-01 98.8% 80.2%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.55 47.0 4.00e-01 100.0% 61.7%
4o5lL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.43e-01 98.8% 80.8%
3d2uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.53e-01 98.8% 84.8%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.55 49.0 3.65e-01 100.0% 84.3%
4q97A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.33e-01 98.8% 76.9%
2qsvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.24e-01 98.8% 74.1%
4q9cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 47.0 4.38e-01 98.8% 80.0%
2wanA01 2.60.40.1130 Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain 0.54 45.0 4.37e-01 100.0% 81.1%
1n71B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 41.0 3.27e-01 82.9% 86.0%
3pv7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 4.39e-01 98.8% 84.0%
4i3gA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 4.18e-01 98.8% 88.6%
3htxD03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 41.0 3.14e-01 85.4% 56.6%
1zo0A00 3.40.630.60 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.53 41.0 3.58e-01 82.9% 54.8%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 4.19e-01 98.8% 81.5%
4mmhA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 44.0 3.14e-01 100.0% 37.9%
4paaA05 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.52 39.0 4.03e-01 82.9% 91.1%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.96e-01 82.9% 91.8%
3mxlA02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.51 41.0 3.88e-01 95.1% 96.2%
2uxwA03 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.50 41.0 3.77e-01 93.9% 97.4%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943489 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.79 59.0 5.55e-01 100.0% 65.0%
4970326 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.76 68.0 6.47e-01 100.0% 85.3%
5035459 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.76 70.0 6.92e-01 100.0% 96.5%
4939191 10.1.1.64 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF2341 0.75 65.0 4.39e-01 100.0% 26.9%
5035871 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.75 66.0 6.32e-01 100.0% 85.3%
5050655 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 58.0 5.35e-01 100.0% 65.7%
3942563 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.74 65.0 6.15e-01 100.0% 96.0%
5019984 12.1.1.114 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF2341 0.73 65.0 6.26e-01 100.0% 88.4%
3575628 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.73 63.0 5.49e-01 100.0% 63.3%
3940248 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.72 66.0 5.74e-01 100.0% 67.5%
4017545 12.1.1.104 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › PcRGLX_1st 0.71 62.0 6.06e-01 100.0% 87.8%
5077834 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.71 60.0 4.12e-01 100.0% 27.1%
5002657 12.1.1.114 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF2341 0.71 59.0 5.87e-01 100.0% 88.2%
3941037 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.71 62.0 4.97e-01 100.0% 51.3%
2420855 1.1.7.42 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PcRGLX_1st 0.69 59.0 5.59e-01 100.0% 78.6%
1312442 12.1.1.43 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_38 0.69 62.0 5.54e-01 100.0% 90.5%
5026861 11.1.1.531 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.69 46.0 4.67e-01 100.0% 70.0%
2427546 12.3.1.30 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PcRGLX_1st 0.68 58.0 5.71e-01 100.0% 89.7%
4189335 11.1.5.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 0.68 55.0 5.54e-01 100.0% 85.7%
5050287 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.68 61.0 5.96e-01 100.0% 97.8%
5038375 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.67 51.0 3.93e-01 100.0% 34.5%
3860290 11.1.1.322 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ITGAX-like_Ig_3 0.67 60.0 4.63e-01 100.0% 54.4%
5034819 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.67 59.0 5.27e-01 100.0% 69.6%
5011987 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 56.0 5.31e-01 98.8% 79.6%
3253381 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 46.0 4.50e-01 100.0% 67.8%
5005659 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.65 56.0 4.97e-01 100.0% 69.6%
5035611 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.64 45.0 3.69e-01 100.0% 38.1%
759 70.2.1.2 beta barrels › beta-clip › dUTPase-like › dUTPase-like › TLP-20 0.64 54.0 5.11e-01 100.0% 77.5%
4097408 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 53.0 5.06e-01 98.8% 80.0%
3250212 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.63 54.0 4.57e-01 100.0% 57.0%
5044223 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 55.0 5.22e-01 100.0% 87.0%
3604533 11.1.1.1128 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27408 0.63 55.0 4.69e-01 100.0% 67.9%
3398713 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 53.0 4.60e-01 97.6% 86.7%
3285854 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.62 56.0 4.80e-01 100.0% 88.4%
5003447 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 54.0 5.11e-01 98.8% 81.0%
3563581 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.62 52.0 4.82e-01 100.0% 74.3%
3622225 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 45.0 4.63e-01 80.5% 81.2%
3242646 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 45.0 4.68e-01 100.0% 86.7%
5038763 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 50.0 4.89e-01 96.3% 82.2%
4984621 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 54.0 5.00e-01 100.0% 80.0%
3542371 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.61 52.0 4.90e-01 98.8% 79.0%
3897045 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.61 49.0 4.59e-01 100.0% 71.4%
3935285 11.1.1.891 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26189 0.61 50.0 4.79e-01 100.0% 80.0%
4944261 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.61 53.0 3.70e-01 100.0% 43.3%
3228954 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 4.59e-01 98.8% 77.5%
4945415 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.60 52.0 4.43e-01 100.0% 57.9%
3447039 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 52.0 4.20e-01 98.8% 67.9%
5050762 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 52.0 4.55e-01 100.0% 65.0%
4946484 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 53.0 4.37e-01 100.0% 54.7%
5053420 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.60 52.0 3.69e-01 100.0% 50.2%
3847028 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 48.0 4.47e-01 98.8% 70.5%
3477446 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.59 51.0 4.81e-01 97.6% 80.0%
4942960 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 52.0 4.38e-01 100.0% 58.6%
3407771 10.32.1.235 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MBF2 0.59 51.0 4.92e-01 100.0% 84.0%
3898329 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.59 49.0 4.59e-01 98.8% 74.3%
3929186 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.59 50.0 4.69e-01 100.0% 77.1%
3255936 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 4.74e-01 98.8% 81.0%
4373993 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 50.0 4.69e-01 98.8% 81.0%
3404844 10.32.1.235 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MBF2 0.58 49.0 4.76e-01 100.0% 83.2%
4024712 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.54e-01 98.8% 84.3%
3762560 11.1.1.178 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.58 47.0 4.52e-01 98.8% 77.9%
5025924 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 50.0 4.50e-01 100.0% 73.3%
3272798 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.57 51.0 4.35e-01 100.0% 67.4%
3886122 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.57 47.0 4.58e-01 100.0% 82.1%
1933637 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.57 49.0 4.58e-01 98.8% 78.4%
4419362 11.1.1.96 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.57 49.0 4.51e-01 98.8% 74.5%
3713410 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.39e-01 100.0% 82.6%
2755161 11.1.1.96 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.55 46.0 4.08e-01 98.8% 61.2%
3488523 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.55 47.0 4.09e-01 98.8% 79.3%
3502521 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 3.93e-01 100.0% 65.2%
5068876 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 4.38e-01 98.8% 81.8%
3499791 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 4.22e-01 98.8% 79.2%
4538883 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 4.40e-01 97.6% 82.1%
3898330 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 47.0 4.40e-01 98.8% 81.0%
5039382 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 47.0 4.68e-01 96.3% 100.0%
3879337 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.09e-01 98.8% 77.8%
1935147 11.1.1.96 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.54 43.0 4.00e-01 98.8% 67.6%
4218099 304.55.1.1 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Gemini_AL1 0.54 44.0 3.78e-01 92.7% 55.6%
3956105 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 4.07e-01 98.8% 80.0%
5006437 70.2.1.6 beta barrels › beta-clip › dUTPase-like › dUTPase-like › DUF22 0.53 45.0 4.07e-01 100.0% 71.4%
3725599 11.1.1.233 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_mannosidase 0.52 46.0 4.31e-01 98.8% 82.0%
3977985 2485.3.1.18 a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.51 34.0 2.34e-01 70.7% 59.5%
D2 high residues 212-357
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nqzA01 3.10.450.490 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 33.0 4.10e-01 78.8% 72.5%
1eq6A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.68 40.0 3.63e-01 82.2% 44.4%
6hpvA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 35.0 4.61e-01 77.4% 89.3%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 38.0 4.43e-01 87.7% 88.0%
6ecaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 29.0 3.49e-01 95.2% 66.3%
1cbyA00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.57 42.0 3.65e-01 78.1% 62.6%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.56 42.0 4.34e-01 76.7% 94.8%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 37.0 3.97e-01 75.3% 77.3%
3bgaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 51.0 4.16e-01 100.0% 91.5%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 39.0 4.48e-01 76.7% 94.6%
2imjD01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 4.24e-01 82.2% 81.0%
5i97C00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.54 40.0 4.17e-01 76.7% 94.9%
4o3vA00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.54 41.0 4.28e-01 80.8% 94.2%
4puxA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.53 43.0 4.21e-01 85.6% 93.6%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.53 41.0 4.20e-01 80.8% 91.7%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 4.45e-01 100.0% 92.5%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.53 44.0 3.68e-01 90.4% 98.5%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 4.30e-01 78.8% 93.7%
1jkgB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 3.85e-01 82.2% 82.8%
3hlkA01 2.60.40.2240 Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain 0.52 36.0 3.73e-01 94.5% 75.6%
3cu3A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 42.0 4.12e-01 87.0% 91.4%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.51 45.0 4.07e-01 93.2% 77.2%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.51 43.0 4.12e-01 92.5% 91.3%
2qiyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 4.07e-01 79.5% 95.5%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 4.18e-01 84.2% 92.8%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.51 47.0 3.73e-01 100.0% 86.8%
4i4kA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 4.12e-01 81.5% 88.4%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 38.0 4.06e-01 78.8% 93.8%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 3.85e-01 80.1% 80.5%
5aigA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 39.0 4.22e-01 89.0% 97.6%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4180235 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.67 36.0 4.78e-01 87.7% 96.2%
3839915 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.57 42.0 4.35e-01 77.4% 88.6%
3852438 883.1.1.24 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF29321 0.56 42.0 3.97e-01 95.2% 62.8%
3320752 243.1.1.49 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 0.56 45.0 4.53e-01 82.9% 86.2%
4565299 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.56 42.0 4.30e-01 78.8% 88.9%
1146680 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.55 42.0 4.25e-01 78.1% 88.9%
3858795 130.1.1.34 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › DUF4518 0.55 42.0 4.25e-01 81.5% 94.7%
3217508 243.1.1.97 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382_N 0.54 40.0 4.35e-01 76.7% 95.2%
2552604 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.54 40.0 4.22e-01 77.4% 93.3%
3268473 243.1.1.87 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_SigF 0.54 43.0 4.67e-01 87.7% 99.2%
3395729 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.54 41.0 4.03e-01 98.6% 73.1%
3672823 243.1.1.49 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 0.54 47.0 4.58e-01 97.3% 85.6%
3727006 243.1.1.9 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF1348 0.53 43.0 4.13e-01 84.2% 78.0%
3859609 243.1.1.40 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.53 41.0 3.81e-01 81.5% 84.2%
6403 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.53 41.0 4.23e-01 80.8% 92.1%
361002 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.53 40.0 4.29e-01 78.8% 93.0%
3713323 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.52 42.0 3.57e-01 84.2% 60.0%
3584293 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.52 45.0 3.70e-01 93.2% 64.6%
3286225 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.52 39.0 4.12e-01 78.1% 95.4%
4586825 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.52 44.0 3.53e-01 93.8% 94.8%
3412367 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.52 46.0 4.28e-01 95.2% 82.3%
4185639 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.51 44.0 3.47e-01 92.5% 97.7%
3893447 243.1.1.40 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.51 39.0 3.58e-01 80.1% 79.5%
4974050 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.51 39.0 4.06e-01 79.5% 91.1%
4037272 243.1.1.90 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26525 0.51 39.0 4.11e-01 99.3% 90.0%
3349123 883.1.1.15 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.51 44.0 3.11e-01 93.2% 31.3%
2326869 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.51 43.0 3.85e-01 92.5% 70.0%
1125573 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.51 38.0 4.03e-01 78.1% 94.6%
3366806 883.1.1.2 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.51 44.0 3.73e-01 95.2% 60.4%
3418946 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 38.0 3.57e-01 78.1% 82.9%
D3 medium residues 705-765
PDB