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04302015_21_scaffold_6_prodigal-single.1__X__X__00022
Bact-Vir04302015_21_scaffold_6_prodigal-single.1__X__X__00022
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-74
Domain cluster:
rep: ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00010__D6-79
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e7zA01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.64 | 45.0 | 4.87e-01 | 100.0% | 93.0% |
| 2olgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 41.0 | 3.58e-01 | 80.3% | 84.3% |
| 4bbyA02 | 3.30.160.650 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 30.0 | 3.52e-01 | 77.5% | 86.4% |
| 1sqhA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 43.0 | 3.62e-01 | 94.4% | 71.8% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.52 | 35.0 | 3.71e-01 | 74.6% | 82.0% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 26.0 | 2.81e-01 | 81.7% | 54.4% |
| 4pz7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 37.0 | 3.00e-01 | 76.1% | 60.6% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 31.0 | 3.24e-01 | 95.8% | 66.7% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.50 | 37.0 | 3.00e-01 | 81.7% | 60.1% |
| 3kptA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 3.22e-01 | 76.1% | 75.5% |
| 2l6oA01 | 2.40.10.320 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain | 0.50 | 37.0 | 3.73e-01 | 88.7% | 81.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3349121 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.63 | 43.0 | 3.37e-01 | 73.2% | 36.8% |
| None | — | 0.61 | 44.0 | 2.84e-01 | 77.5% | 81.1% | |
| 4932654 | 284.4.1.1 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_IF | 0.59 | 27.0 | 3.10e-01 | 70.4% | 52.0% |
| 4940662 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.03e-01 | 77.5% | 81.5% |
| 3626927 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 28.0 | 3.06e-01 | 81.7% | 54.5% |
| 4979920 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.54 | 41.0 | 2.95e-01 | 85.9% | 57.1% |
| 3595436 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.54 | 37.0 | 3.09e-01 | 93.0% | 39.3% |
| 3941506 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.52 | 40.0 | 2.72e-01 | 91.5% | 70.4% |
| 3656728 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.52 | 33.0 | 3.60e-01 | 85.9% | 79.7% |
| None | — | 0.51 | 42.0 | 2.64e-01 | 94.4% | 94.6% | |
| 3390679 | 11.1.1.197 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › RHD_dimer | 0.51 | 36.0 | 2.98e-01 | 76.1% | 62.1% |
| 3284788 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.50 | 37.0 | 3.66e-01 | 81.7% | 78.8% |
| 3927505 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.50 | 38.0 | 3.67e-01 | 81.7% | 96.2% |
| 3197689 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.50 | 36.0 | 2.85e-01 | 77.5% | 61.9% |