←Back to structures
04302015_21_scaffold_6_prodigal-single.1__X__X__00075
Bact-Vir04302015_21_scaffold_6_prodigal-single.1__X__X__00075
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 61-160
Domain cluster:
rep: BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00008__D242-335
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26209.2 best | Phage_phiTE_241_C | 28.3 | 2.10e-06 | 88.0% | 81.7% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5lwxA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.68 | 51.0 | 4.46e-01 | 79.0% | 67.1% |
| 3g5wA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.67 | 50.0 | 4.25e-01 | 79.0% | 69.9% |
| 2xu9A03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.65 | 49.0 | 4.47e-01 | 78.0% | 75.8% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.65 | 49.0 | 4.83e-01 | 100.0% | 74.5% |
| 4knuA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.65 | 49.0 | 4.18e-01 | 79.0% | 76.1% |
| 2dv6A01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.64 | 48.0 | 4.67e-01 | 79.0% | 77.0% |
| 2dv6A02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.64 | 52.0 | 3.69e-01 | 88.0% | 44.0% |
| 4f2eA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.64 | 48.0 | 4.84e-01 | 86.0% | 80.6% |
| 2r7eB02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.63 | 47.0 | 4.14e-01 | 78.0% | 83.6% |
| 5ocbA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.61 | 53.0 | 4.63e-01 | 97.0% | 73.1% |
| 3kd4A03 | 2.60.120.1130 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 44.0 | 4.00e-01 | 81.0% | 91.2% |
| 3pnrB00 | 2.60.40.2020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 43.0 | 3.97e-01 | 79.0% | 81.4% |
| 3dcyA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.56 | 52.0 | 3.83e-01 | 100.0% | 72.9% |
| 4p02B03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 42.0 | 3.86e-01 | 84.0% | 74.1% |
| 4n2kA01 | 2.60.40.1860 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain | 0.50 | 40.0 | 3.84e-01 | 99.0% | 74.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942383 | 520.2.1.0 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE | 0.69 | 55.0 | 5.78e-01 | 100.0% | 95.6% |
| 5043725 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 51.0 | 4.72e-01 | 80.0% | 81.5% |
| 4286724 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.65 | 49.0 | 3.57e-01 | 80.0% | 72.8% |
| 3435189 | 3156.1.1.4 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase | 0.62 | 46.0 | 4.16e-01 | 77.0% | 100.0% |
| 4143020 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.61 | 53.0 | 3.98e-01 | 100.0% | 63.7% |
| 5039414 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.60 | 45.0 | 4.13e-01 | 78.0% | 75.4% |
| 4420723 | 1160.1.1.1 ↗ | beta duplicates or obligate multimers › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › TGFBR3_N | 0.59 | 43.0 | 3.95e-01 | 83.0% | 58.5% |
| 4471739 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.59 | 52.0 | 3.91e-01 | 100.0% | 74.6% |
| 4316605 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.58 | 51.0 | 3.85e-01 | 100.0% | 73.8% |
| 147039 | 3251.1.1.1 ↗ | a+b two layers › C-terminal domain in putative protease YP_001302526.1 › C-terminal domain in putative protease YP_001302526.1 › C-terminal domain in putative protease YP_001302526.1 › DUF3858 | 0.58 | 44.0 | 4.00e-01 | 82.0% | 90.6% |
| 4041561 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.57 | 50.0 | 3.82e-01 | 100.0% | 72.5% |
| 4244689 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.57 | 49.0 | 3.74e-01 | 100.0% | 71.1% |
| 4320009 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.57 | 49.0 | 3.76e-01 | 100.0% | 73.1% |
| 4929387 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.53 | 35.0 | 4.07e-01 | 98.0% | 97.1% |
| 4330222 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.53 | 48.0 | 4.55e-01 | 100.0% | 84.2% |
| 5041137 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.50 | 34.0 | 3.81e-01 | 100.0% | 100.0% |