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04302015_21_scaffold_6_prodigal-single.1__X__X__00162
Bact-Vir04302015_21_scaffold_6_prodigal-single.1__X__X__00162
Identity
- Kingdom:
- phage
Quality
67.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-79_236-273
D2
medium
residues 80-235
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00355__D28-197
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qc5X01 | 2.60.40.3260 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 35.0 | 3.69e-01 | 98.1% | 67.8% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 33.0 | 4.12e-01 | 83.3% | 100.0% |
| 1loxA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.54 | 35.0 | 4.08e-01 | 88.5% | 91.0% |
| 6qe7A01 | 3.90.182.10 | Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 | 0.52 | 39.0 | 4.17e-01 | 90.4% | 89.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3407712 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.58 | 36.0 | 4.32e-01 | 82.7% | 96.9% |
| 4930314 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.55 | 31.0 | 4.01e-01 | 80.1% | 100.0% |
| 5075927 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.55 | 32.0 | 4.04e-01 | 80.8% | 100.0% |
| 4180650 | 11.1.1.531 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 | 0.54 | 35.0 | 3.88e-01 | 98.1% | 84.2% |
| 4984953 | 11.1.1.1436 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27849 | 0.53 | 36.0 | 3.89e-01 | 96.2% | 80.7% |
| 5010649 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 29.0 | 3.68e-01 | 93.6% | 97.7% |
| 3663280 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 35.0 | 3.69e-01 | 92.3% | 80.7% |
| 3917433 | 325.1.7.23 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › BSH_Fcp1 | 0.50 | 24.0 | 2.87e-01 | 97.4% | 65.0% |