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04302015_21_scaffold_6_prodigal-single.1__X__X__00242

Bact-Vir

04302015_21_scaffold_6_prodigal-single.1__X__X__00242

Identity

Kingdom:
phage

Quality

72.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-76
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.82 57.0 5.00e-01 100.0% 50.5%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 47.0 4.72e-01 92.1% 57.7%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 57.0 6.04e-01 100.0% 89.7%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.74 52.0 5.52e-01 93.4% 83.6%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 57.0 5.76e-01 92.1% 85.3%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.72 52.0 5.33e-01 100.0% 78.1%
3fb2A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 60.0 5.43e-01 94.7% 67.6%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 53.0 5.45e-01 80.3% 84.5%
3ggyA00 1.20.1260.60 Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 0.70 62.0 4.70e-01 100.0% 68.3%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.70 56.0 5.70e-01 89.5% 89.3%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 51.0 5.54e-01 89.5% 98.4%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.69 57.0 5.43e-01 94.7% 77.8%
6v9zA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.69 58.0 3.82e-01 94.7% 59.4%
4egwA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.68 56.0 4.84e-01 90.8% 63.0%
3ibpA01 1.20.58.850 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 54.0 5.52e-01 94.7% 90.3%
2odmA00 1.10.287.750 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like 0.68 44.0 4.43e-01 100.0% 64.6%
2gd5A00 6.10.140.1230 Special › Helix non-globular › Helix Hairpins › 0.68 59.0 4.88e-01 100.0% 83.8%
4wpeA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 58.0 3.99e-01 97.4% 74.5%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.67 58.0 4.94e-01 100.0% 81.5%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 57.0 5.13e-01 97.4% 69.1%
4gczA03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.67 48.0 5.04e-01 78.9% 89.2%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.66 52.0 4.87e-01 89.5% 73.7%
1a36A04 1.10.132.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.66 51.0 3.91e-01 100.0% 36.6%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.66 58.0 4.87e-01 100.0% 57.1%
1t72A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.65 53.0 4.66e-01 97.4% 59.0%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.65 54.0 5.50e-01 100.0% 97.3%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.65 54.0 3.92e-01 94.7% 66.5%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.65 55.0 5.40e-01 98.7% 89.0%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 49.0 4.83e-01 93.4% 76.5%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 53.0 3.81e-01 94.7% 29.7%
6bl6B01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.65 54.0 3.62e-01 94.7% 57.3%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.64 50.0 4.59e-01 94.7% 63.2%
3cwzB01 1.20.58.900 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain 0.64 51.0 4.20e-01 96.1% 46.6%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.64 50.0 4.96e-01 100.0% 80.0%
1x04A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.63 55.0 4.11e-01 100.0% 78.5%
8a1gC01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.63 54.0 4.14e-01 97.4% 80.7%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 49.0 4.98e-01 100.0% 91.7%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.62 54.0 4.98e-01 98.7% 77.0%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.62 53.0 5.42e-01 100.0% 100.0%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 46.0 4.94e-01 100.0% 98.4%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.62 54.0 5.08e-01 100.0% 87.2%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.62 52.0 5.19e-01 98.7% 93.6%
2ke4A00 6.10.140.470 Special › Helix non-globular › Helix Hairpins › 0.61 48.0 4.45e-01 86.8% 74.5%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.61 54.0 5.04e-01 100.0% 89.6%
3tbiB02 6.10.140.1670 Special › Helix non-globular › Helix Hairpins › 0.61 52.0 4.81e-01 100.0% 99.0%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.60 45.0 4.83e-01 85.5% 100.0%
3teqB00 1.10.287.3550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 51.0 4.75e-01 100.0% 89.1%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.59 51.0 4.24e-01 100.0% 54.4%
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.59 48.0 3.61e-01 92.1% 70.5%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.58 48.0 4.37e-01 100.0% 66.1%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.58 46.0 4.30e-01 97.4% 68.6%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.58 48.0 4.45e-01 98.7% 78.4%
2ieqA00 1.20.5.300 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.56 46.0 4.48e-01 94.7% 95.5%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 49.0 4.93e-01 96.1% 97.4%
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 36.0 3.50e-01 73.7% 63.1%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 42.0 4.27e-01 94.7% 90.9%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3578653 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.73 60.0 4.55e-01 90.8% 40.0%
3919099 621.1.1.8 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GVIN1 0.72 62.0 5.04e-01 100.0% 51.9%
4936252 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.71 60.0 5.56e-01 100.0% 73.7%
3273862 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.71 58.0 5.40e-01 94.7% 72.6%
None 0.70 60.0 4.44e-01 96.1% 37.0%
3514718 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.70 60.0 5.24e-01 100.0% 63.5%
5044800 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.69 58.0 5.78e-01 94.7% 98.8%
4016635 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.69 56.0 5.16e-01 94.7% 69.0%
3943738 5069.1.1.3 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I 0.68 54.0 4.15e-01 86.8% 53.1%
3215342 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.68 57.0 5.33e-01 98.7% 75.8%
5064482 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 56.0 4.44e-01 94.7% 44.8%
4048127 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 55.0 5.38e-01 98.7% 84.7%
3917090 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.67 57.0 4.81e-01 98.7% 56.3%
4129922 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.66 49.0 4.51e-01 84.2% 60.0%
5028533 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.66 53.0 4.56e-01 90.8% 56.2%
3933045 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.66 52.0 3.99e-01 89.5% 35.4%
2674763 5041.1.1.1 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.66 55.0 5.54e-01 100.0% 96.0%
4798159 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.66 53.0 5.32e-01 100.0% 90.8%
3389567 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.65 53.0 4.02e-01 92.1% 54.7%
3167298 3711.1.1.0 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.65 57.0 5.15e-01 100.0% 78.1%
3931719 3291.1.1.1 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.65 53.0 4.48e-01 94.7% 52.6%
3934585 3755.3.1.465 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A 0.64 56.0 4.54e-01 100.0% 58.0%
3799718 11.2.1.25 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PL48 0.64 55.0 3.92e-01 98.7% 44.8%
3917888 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.64 52.0 4.60e-01 94.7% 60.0%
3548194 192.2.1.18 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.64 54.0 4.93e-01 100.0% 71.8%
3595103 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.64 49.0 4.09e-01 88.2% 46.7%
3810801 632.22.1.139 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › KIF21A_4th 0.64 53.0 4.33e-01 94.7% 50.0%
3503444 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.64 52.0 4.99e-01 98.7% 77.8%
3655688 3755.3.1.303 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th 0.64 52.0 4.11e-01 94.7% 42.3%
3291377 605.1.1.4 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 0.63 54.0 5.10e-01 100.0% 86.3%
3664164 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.63 55.0 4.65e-01 100.0% 65.4%
4784166 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.63 49.0 5.05e-01 100.0% 91.4%
3200160 604.7.1.0 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.63 53.0 4.74e-01 100.0% 65.5%
4177674 4992.1.1.23 extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.63 51.0 4.55e-01 94.7% 62.7%
4652719 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.62 51.0 4.75e-01 100.0% 71.6%
5057549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 4.29e-01 93.4% 55.9%
4937862 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.62 51.0 4.62e-01 94.7% 73.6%
3487862 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.62 51.0 3.69e-01 100.0% 30.0%
3556027 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.62 49.0 4.81e-01 88.2% 78.8%
4991089 5069.1.1.3 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I 0.62 49.0 3.79e-01 89.5% 48.6%
3491418 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.62 51.0 5.15e-01 100.0% 96.0%
4051951 605.2.1.0 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 0.61 50.0 4.73e-01 100.0% 75.6%
3709352 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.61 53.0 4.29e-01 100.0% 87.7%
3626769 192.5.1.14 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA 0.61 52.0 5.00e-01 100.0% 84.4%
1139567 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.61 47.0 4.47e-01 89.5% 71.1%
3550436 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.61 52.0 4.80e-01 100.0% 74.0%
2323907 212.1.1.24 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 0.60 47.0 3.53e-01 96.1% 30.4%
5002748 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.60 49.0 5.01e-01 98.7% 96.0%
3925617 192.5.1.14 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA 0.60 51.0 5.00e-01 100.0% 89.4%
3902100 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.60 50.0 4.85e-01 94.7% 85.9%
5025071 5069.1.1.3 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I 0.60 50.0 3.86e-01 93.4% 52.0%
3836427 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.59 52.0 4.79e-01 100.0% 75.0%
3567670 192.5.1.14 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA 0.59 52.0 4.94e-01 98.7% 85.6%
3855461 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.58 49.0 4.73e-01 94.7% 85.9%
4474737 3711.1.1.44 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Med11 0.58 48.0 4.61e-01 94.7% 90.0%
3529707 4.1.1.453 beta barrels › SH3 › SH3 › SH3 › HR1_TOCA 0.57 50.0 4.67e-01 98.7% 82.1%
3663959 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.57 46.0 3.95e-01 93.4% 55.4%
3748986 3755.3.1.322 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › LUC7 0.54 46.0 3.64e-01 100.0% 44.6%
D2 medium residues 111-199_252-286
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4oi4C01 2.60.120.1030 Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain 0.59 32.0 3.81e-01 82.3% 77.4%
3g7dA03 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 33.0 3.38e-01 79.8% 56.5%
4mzuF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 34.0 3.24e-01 81.5% 51.4%
5tpvB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 34.0 3.33e-01 81.5% 55.1%
3fmgA02 2.60.120.800 Mainly Beta › Sandwich › Jelly Rolls › Rotavirus outer-layer protein VP7, domain 2 0.55 32.0 3.75e-01 76.6% 81.6%
4h4nA00 2.60.40.3750 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 26.0 3.57e-01 78.2% 93.5%
3breA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.51 37.0 3.22e-01 74.2% 74.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3306580 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 27.0 3.60e-01 78.2% 78.3%
4679947 10.34.1.1 beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain › CLP1_N 0.58 33.0 3.95e-01 79.8% 85.0%
185779 3566.1.1.1 beta sandwiches › hypothetical protein BA_2335 › hypothetical protein BA_2335 › hypothetical protein BA_2335 › BA_2335-like 0.53 26.0 3.57e-01 78.2% 93.5%
D3 medium residues 200-251_287-332
PDB
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1winA01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.74 67.0 6.28e-01 96.9% 93.2%
7vhqU01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.72 65.0 6.28e-01 96.9% 91.8%
2zuoA10 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.71 64.0 6.08e-01 96.9% 96.5%
2rpbA00 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.64 56.0 5.40e-01 96.9% 88.5%
3le4A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.63 22.0 2.85e-01 93.9% 47.3%
8eilD01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.57 41.0 3.41e-01 96.9% 42.9%
2pk0A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.53 47.0 3.51e-01 99.0% 42.9%
2irmA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.52 46.0 3.21e-01 100.0% 71.4%
2iq1A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.51 45.0 3.36e-01 99.0% 38.1%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944186 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 76.0 6.60e-01 98.0% 77.9%
4965684 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.81 76.0 6.73e-01 100.0% 83.0%
4947843 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.80 74.0 6.71e-01 96.9% 85.6%
5058702 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.79 72.0 6.36e-01 96.9% 83.0%
4956270 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.79 73.0 5.99e-01 100.0% 66.5%
3728098 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.78 71.0 6.07e-01 96.9% 84.0%
5028381 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.78 72.0 6.34e-01 96.9% 76.3%
5001545 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.77 71.0 6.23e-01 96.9% 73.3%
4398398 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.77 70.0 5.82e-01 96.9% 74.4%
5050182 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.77 70.0 5.52e-01 96.9% 57.8%
3260338 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.77 70.0 6.39e-01 96.9% 79.2%
4944893 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.76 70.0 6.26e-01 96.9% 82.3%
3597939 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.76 69.0 6.25e-01 96.9% 76.9%
4946531 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.76 69.0 6.33e-01 96.9% 85.6%
5010097 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 69.0 6.53e-01 96.9% 93.0%
4970323 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 69.0 6.29e-01 96.9% 88.8%
3974085 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 69.0 6.43e-01 96.9% 82.5%
3599340 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.76 69.0 6.12e-01 96.9% 75.6%
3605179 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 69.0 5.68e-01 96.9% 61.8%
5069131 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 69.0 6.22e-01 96.9% 76.2%
3269095 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 69.0 6.30e-01 96.9% 78.4%
3959591 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.76 69.0 6.49e-01 96.9% 86.1%
4995673 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 69.0 6.40e-01 96.9% 83.3%
3312228 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 68.0 6.07e-01 96.9% 75.6%
3700069 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 69.0 6.47e-01 96.9% 87.8%
3602552 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 69.0 5.78e-01 96.9% 63.9%
5012808 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 68.0 5.82e-01 96.9% 71.3%
3386432 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 69.0 5.71e-01 99.0% 73.3%
5059138 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.75 67.0 6.19e-01 96.9% 93.6%
4941790 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 68.0 5.95e-01 96.9% 71.4%
3333427 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 68.0 5.45e-01 96.9% 56.1%
3795433 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 68.0 6.12e-01 96.9% 77.7%
3271328 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 68.0 6.68e-01 96.9% 93.3%
3355174 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 68.0 6.30e-01 96.9% 84.2%
3289226 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 68.0 6.41e-01 96.9% 93.9%
4932838 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.75 68.0 6.36e-01 98.0% 82.5%
3487126 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.75 68.0 6.01e-01 96.9% 75.6%
3732337 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 68.0 6.09e-01 96.9% 76.2%
4977988 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 68.0 6.00e-01 96.9% 73.3%
3998793 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 5.62e-01 96.9% 68.1%
5059432 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 6.26e-01 96.9% 89.2%
5058343 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 6.14e-01 96.9% 84.0%
4944483 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 6.07e-01 96.9% 76.2%
3227676 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 5.62e-01 96.9% 61.9%
3482847 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.74 68.0 6.20e-01 98.0% 88.0%
4009220 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.74 67.0 4.52e-01 96.9% 34.2%
3523996 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 6.35e-01 96.9% 86.1%
4927252 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 5.95e-01 96.9% 74.8%
3976795 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 5.95e-01 96.9% 84.4%
3496975 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.74 67.0 6.04e-01 96.9% 76.2%
5054379 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 6.03e-01 96.9% 76.2%
4490995 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 4.77e-01 96.9% 41.5%
3500570 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 67.0 5.69e-01 96.9% 66.0%
3937096 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.74 66.0 6.18e-01 96.9% 84.2%
3961248 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 67.0 5.57e-01 99.0% 68.5%
4670893 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 66.0 5.78e-01 96.9% 81.4%
3700023 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 66.0 6.14e-01 96.9% 84.2%
3883427 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 66.0 5.46e-01 96.9% 60.0%
3237534 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 66.0 6.22e-01 96.9% 86.1%
4991921 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 66.0 5.43e-01 96.9% 60.0%
3569209 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 65.0 6.19e-01 96.9% 86.1%
3253337 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.73 65.0 6.18e-01 96.9% 86.1%
3599357 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.72 64.0 5.97e-01 95.9% 98.3%
3840749 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.71 64.0 6.05e-01 96.9% 86.1%
3719141 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.71 64.0 4.60e-01 96.9% 42.6%
4025984 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.71 63.0 5.92e-01 96.9% 92.5%
3718698 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.70 64.0 4.43e-01 96.9% 38.3%
3531258 230.5.1.2 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.70 64.0 5.65e-01 96.9% 91.1%
5060336 230.5.1.4 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.70 63.0 5.64e-01 98.0% 87.4%
3595900 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.70 63.0 4.43e-01 96.9% 39.6%
4960853 230.5.1.4 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.70 61.0 5.44e-01 96.9% 84.3%
4958534 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.67 32.0 3.41e-01 96.9% 48.9%
3501639 230.5.1.0 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.66 59.0 5.33e-01 96.9% 80.8%
4996557 230.5.1.1 a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.66 58.0 5.51e-01 98.0% 95.7%
4954308 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.50 41.0 3.24e-01 89.8% 80.9%