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04302015_21_scaffold_6_prodigal-single.1__X__X__00253
Bact-Vir04302015_21_scaffold_6_prodigal-single.1__X__X__00253
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-119_214-260
Domain cluster:
rep: IMGVR_UViG_3300025859_001166-3300025859-Ga0209096_100026138__D12-148
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.57 | 40.0 | 3.60e-01 | 70.2% | 84.5% |
| 3ndhA00 | 3.40.600.30 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › | 0.55 | 50.0 | 4.60e-01 | 100.0% | 78.0% |
| 2hv2A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 26.0 | 3.25e-01 | 75.8% | 74.7% |
| 5c0yA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.52 | 29.0 | 3.76e-01 | 80.1% | 94.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5005255 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 73.0 | 6.32e-01 | 100.0% | 94.2% |
| 5035680 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 55.0 | 5.38e-01 | 96.3% | 93.8% |
| 4627429 | 2008.1.1.180 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27366, PF30697 | 0.56 | 49.0 | 4.19e-01 | 96.3% | 81.1% |
| 4219781 | 2008.1.1.184 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SmaI | 0.56 | 51.0 | 4.56e-01 | 100.0% | 83.0% |
| 4967616 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 48.0 | 4.70e-01 | 95.0% | 87.2% |
| 3356244 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.53 | 31.0 | 3.29e-01 | 77.0% | 64.3% |
| 3278644 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.50 | 31.0 | 3.00e-01 | 77.0% | 53.9% |
D2
high
residues 135-211