050L

Euk-Vir

Cherax_quadricarinatus_iridovirus

050L__YP_009552331__Cherax_quadricarinatus_iridovirus__2035708

Identity

75.4 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Decapodiridovirus› Cherax_quadricarinatus_iridovirus

TaxID: 2035708

View cluster (12 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 339-447

PDB

Domain cluster: rep: BV_ODV-E26__YP_009666490__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D138-232

D2 medium residues 31-84_157-202

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10553.15 best	MSV199	29.8	8.90e-07	32.0%	22.0%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4gczA03	1.10.287.130	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain	0.62	39.0	4.67e-01	82.0%	98.5%
1u5pA01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.57	46.0	4.47e-01	91.0%	78.7%
2hujA00	1.20.120.440	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like	0.54	42.0	3.94e-01	84.0%	98.4%
1owaA02	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.53	43.0	4.28e-01	93.0%	83.0%
1kf6A03	1.20.58.100	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain	0.51	40.0	3.80e-01	93.0%	70.0%
3tixA02	6.10.140.1690	Special › Helix non-globular › Helix Hairpins ›	0.50	36.0	3.99e-01	92.0%	93.7%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5027523	601.7.1.73 ↗	alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like_2	0.59	40.0	3.76e-01	82.0%	57.5%
3796146	601.1.2.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608)	0.58	51.0	4.07e-01	97.0%	76.5%
3957800	191.1.1.0 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain	0.51	36.0	3.32e-01	76.0%	55.2%
3165055	5060.2.1.1 ↗	alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF	0.51	37.0	3.52e-01	75.0%	97.4%

D3 medium residues 85-156

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10553.15 best	MSV199	54.6	1.90e-14	100.0%	50.0%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2olnA02	3.30.9.10	Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2	0.69	51.0	3.85e-01	100.0%	33.7%
1gc5A01	3.40.1190.20	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase	0.59	50.0	3.28e-01	100.0%	43.3%
1t6sA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	37.0	3.58e-01	100.0%	58.1%
2z99A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.55	36.0	3.44e-01	100.0%	55.2%
2vlaA03	1.10.10.2090	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.52	42.0	3.60e-01	91.7%	60.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5014584	101.1.2.932 ↗	alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc	0.58	47.0	4.52e-01	100.0%	78.8%
5012656	330.5.1.0 ↗	a+b two layers › dsRBD-like › Bacillus phage protein › Bacillus phage protein	0.52	44.0	4.19e-01	94.4%	92.9%

D4 medium residues 203-280

PDB

Domain cluster: representative