←Back to structures
053L
Euk-VirCherax_quadricarinatus_iridovirus
053L__YP_009552334__Cherax_quadricarinatus_iridovirus__2035708
Identity
- Accession:
- YP_009552334 ↗
- Protein ID:
- 053L
- Kingdom:
- euk
Quality
79.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Decapodiridovirus›
Cherax_quadricarinatus_iridovirus
TaxID: 2035708
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-187
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10553.15 best | MSV199 | 68.4 | 1.10e-18 | 73.0% | 61.4% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bezA02 | 3.40.1750.10 | Alpha Beta › 3-Layer(aba) Sandwich › peptide peptidase (sppa) fold › peptide peptidase (sppa) like domain | 0.67 | 24.0 | 2.87e-01 | 75.2% | 46.4% |
| 4gdnC00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 40.0 | 3.10e-01 | 75.2% | 95.4% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 30.0 | 3.21e-01 | 70.9% | 59.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954530 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.61 | 44.0 | 4.81e-01 | 74.5% | 99.1% |
| 3978692 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.59 | 52.0 | 5.12e-01 | 92.9% | 97.3% |
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.58 | 39.0 | 4.28e-01 | 74.5% | 85.5% |
| 3941747 | 101.1.9.78 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › AntA | 0.57 | 43.0 | 4.75e-01 | 97.9% | 100.0% |
| 4935867 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.56 | 44.0 | 3.89e-01 | 82.3% | 62.9% |
| 3947416 | 101.1.9.88 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha | 0.56 | 42.0 | 4.66e-01 | 100.0% | 100.0% |
| 4678830 | 304.60.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10, PF27436 | 0.53 | 41.0 | 3.73e-01 | 80.9% | 70.9% |
| 3950224 | 304.60.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10, PF27436 | 0.53 | 40.0 | 3.73e-01 | 79.4% | 76.0% |
| 4149886 | 304.60.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 | 0.52 | 39.0 | 3.68e-01 | 78.0% | 76.5% |
| 5389 | 304.60.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10, PF27436 | 0.52 | 39.0 | 3.69e-01 | 80.1% | 76.8% |
| 3489101 | 304.60.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like | 0.51 | 38.0 | 3.67e-01 | 79.4% | 80.6% |
| 4397193 | 304.60.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10, PF27436 | 0.51 | 37.0 | 3.61e-01 | 76.6% | 80.0% |
| 3734615 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.50 | 38.0 | 2.85e-01 | 79.4% | 62.5% |