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097L

Euk-Vir

Cherax_quadricarinatus_iridovirus

097L__YP_009552378__Cherax_quadricarinatus_iridovirus__2035708

Identity

Accession:
YP_009552378 ↗
Protein ID:
097L
Kingdom:
euk

Quality

70.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Decapodiridovirus› Cherax_quadricarinatus_iridovirus

TaxID: 2035708

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 82-192
PDB
Domain cluster: rep: DNA-directed_RNA_polymerase_II_largest_subunit__YP_010084808__Shrimp_hemocyte_iridescent_virus__2039780__D81-188
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04997.18 best RNA_pol_Rpb1_1 43.1 5.00e-11 99.1% 35.9%
D2 high residues 516-657
PDB
Domain cluster: rep: putative_DNA_directed_RNA_polymerase_largest_subunit__YP_009052394__Aureococcus_anophagefferens_virus__1474867__D487-612
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04983.24 best RNA_pol_Rpb1_3 85.3 6.20e-24 100.0% 92.0%
D3 medium residues 16-81_195-206
PDB
Domain cluster: rep: pig_ID_3158_F95_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00084__D6-65_144-157
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04997.18 best RNA_pol_Rpb1_1 57.5 2.00e-15 100.0% 22.4%
D4 medium residues 207-288
PDB
Domain cluster: rep: MG592415.1__AUR83112.1__NVP1031O_130__00130__D240-321
D5 medium residues 289-324_441-501
PDB
Domain cluster: rep: DNA-dependent_RNA_polymerase_subunit_rpo147__YP_232980__Vaccinia_virus__10245__D277-311_370-443
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00623.26 best RNA_pol_Rpb1_2 87.3 2.00e-24 69.1% 39.8%
PF00623.26 RNA_pol_Rpb1_2 31.9 2.10e-07 35.0% 19.3%
D6 medium residues 325-440
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1twfA04 3.30.1490.180 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase ii 0.84 44.0 6.14e-01 100.0% 98.4%
4xttA00 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.67 34.0 3.92e-01 100.0% 67.1%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 32.0 3.65e-01 94.8% 82.6%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4932732 275.1.1.0 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase 0.80 38.0 5.65e-01 94.0% 100.0%
5020252 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.51 35.0 3.55e-01 100.0% 70.0%
D7 medium residues 664-822
PDB
D8 medium residues 824-868_974-1019_1216-1257
PDB
D9 medium residues 869-973
PDB
D10 medium residues 1020-1051_1146-1215
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04998.23 best RNA_pol_Rpb1_5 38.6 1.20e-09 98.0% 23.6%
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cg4A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.69 47.0 5.18e-01 70.6% 89.3%
2efpA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 48.0 4.91e-01 71.6% 78.6%
2gqqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 47.0 5.11e-01 70.6% 90.6%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.67 47.0 4.88e-01 71.6% 77.9%
2djwA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.67 46.0 5.34e-01 70.6% 98.6%
2p5vA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.67 46.0 5.05e-01 70.6% 90.5%
1mwyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 46.0 5.24e-01 84.3% 100.0%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.65 46.0 3.95e-01 74.5% 50.9%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 50.0 5.07e-01 82.4% 100.0%
2bj3D02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.65 44.0 4.86e-01 70.6% 95.1%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 44.0 4.85e-01 71.6% 95.1%
1itpA00 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.64 45.0 5.07e-01 87.3% 97.4%
2m9kA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 45.0 4.68e-01 72.5% 89.2%
2qz8A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.64 44.0 4.85e-01 70.6% 90.1%
4oj3B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 43.0 4.50e-01 72.5% 88.4%
2n3lA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.62 46.0 4.85e-01 77.5% 96.6%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.61 43.0 4.62e-01 73.5% 91.0%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.61 42.0 4.65e-01 71.6% 96.3%
3mwbB03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 43.0 4.41e-01 73.5% 89.5%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.60 44.0 4.71e-01 77.5% 89.5%
2qyxB01 3.30.70.1360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like 0.60 42.0 4.16e-01 72.5% 82.6%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 44.0 4.93e-01 85.3% 100.0%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.60 38.0 4.20e-01 74.5% 80.5%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.60 45.0 4.87e-01 83.3% 96.5%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 41.0 4.30e-01 72.5% 87.1%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 41.0 4.11e-01 71.6% 79.6%
1weyA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.58 47.0 4.75e-01 96.1% 87.5%
1yqhA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 41.0 4.11e-01 72.5% 78.8%
2cqiA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 48.0 4.82e-01 90.2% 90.3%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 43.0 4.71e-01 86.3% 100.0%
2atzA00 3.90.920.20 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like 0.56 46.0 3.90e-01 92.2% 52.3%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 38.0 4.34e-01 70.6% 98.6%
2mobA00 3.90.56.10 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM 0.56 40.0 4.12e-01 74.5% 100.0%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.56 47.0 4.64e-01 91.2% 96.2%
5wm1A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.55 45.0 4.41e-01 86.3% 99.1%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 45.0 4.71e-01 89.2% 97.9%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.55 43.0 4.46e-01 94.1% 91.4%
2hiyA01 3.30.70.1280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains 0.55 44.0 4.67e-01 95.1% 100.0%
2qrrA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 38.0 3.88e-01 70.6% 91.8%
4lvnP00 3.30.70.2380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 40.0 4.41e-01 93.1% 100.0%
3n89A02 3.30.310.210 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.54 45.0 4.11e-01 92.2% 86.1%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.52 30.0 3.43e-01 73.5% 75.6%
1vx7G00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.52 42.0 3.99e-01 89.2% 90.3%
2f06A00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.52 43.0 3.91e-01 93.1% 86.8%
3tviA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.51 43.0 3.83e-01 97.1% 89.3%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.51 43.0 3.87e-01 95.1% 87.7%
2kskA00 3.30.30.10 Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like 0.51 33.0 3.76e-01 97.1% 95.8%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.50 41.0 4.00e-01 92.2% 80.2%
5jpnC01 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.50 41.0 3.73e-01 88.2% 66.9%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5052110 4956.1.1.0 ↗ a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.84 58.0 6.73e-01 70.6% 100.0%
4943248 4956.1.1.0 ↗ a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.76 70.0 5.40e-01 100.0% 50.0%
5070514 4954.1.1.1 ↗ a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.75 69.0 5.11e-01 100.0% 44.0%
4343880 304.28.1.2 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.69 48.0 5.18e-01 71.6% 98.8%
4977740 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.68 48.0 5.21e-01 71.6% 90.6%
3278158 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.68 48.0 5.20e-01 71.6% 90.6%
4956291 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.68 47.0 4.99e-01 70.6% 83.3%
3599334 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.68 48.0 4.88e-01 73.5% 96.0%
5065226 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.68 47.0 4.89e-01 71.6% 82.1%
5079487 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.67 47.0 5.28e-01 72.5% 95.0%
5009749 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.66 47.0 4.96e-01 72.5% 85.6%
5058497 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.66 46.0 4.98e-01 71.6% 91.8%
5047432 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.65 44.0 4.72e-01 70.6% 85.6%
5031028 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.65 45.0 4.39e-01 71.6% 71.8%
4985748 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.64 44.0 4.64e-01 70.6% 82.8%
3552754 304.163.1.1 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.64 44.0 4.84e-01 70.6% 97.5%
3692980 304.9.1.40 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › BRAP2 0.64 45.0 4.09e-01 72.5% 65.9%
184476 304.9.1.32 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Ret2_MD 0.64 46.0 4.81e-01 75.5% 100.0%
3172922 304.9.1.161 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF30126 0.64 44.0 4.62e-01 70.6% 93.3%
5072282 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 43.0 4.58e-01 70.6% 87.8%
3449952 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 44.0 4.62e-01 71.6% 94.4%
5266 304.8.1.12 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.63 42.0 4.91e-01 70.6% 100.0%
4996908 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.63 43.0 4.58e-01 70.6% 89.8%
3684865 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 44.0 4.36e-01 71.6% 81.0%
4048556 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.62 43.0 4.53e-01 70.6% 87.8%
4603561 304.14.1.1 ↗ a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.62 43.0 4.69e-01 71.6% 98.8%
3948852 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.62 44.0 4.67e-01 74.5% 100.0%
4440255 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.61 44.0 4.69e-01 74.5% 97.8%
4954911 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.61 43.0 4.64e-01 73.5% 98.8%
4984318 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.61 42.0 4.47e-01 71.6% 90.0%
5053492 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.61 42.0 4.43e-01 70.6% 87.8%
5013209 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.61 42.0 4.29e-01 71.6% 86.0%
4223798 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.61 42.0 4.40e-01 70.6% 87.8%
4534160 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.61 42.0 4.51e-01 71.6% 90.6%
3313280 304.9.1.47 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.60 45.0 4.79e-01 87.3% 90.0%
3405901 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 46.0 4.92e-01 93.1% 98.8%
3500427 3914.1.1.2 ↗ alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer 0.60 48.0 2.90e-01 88.2% 80.0%
5033229 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 41.0 4.37e-01 72.5% 92.2%
5028338 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 41.0 4.13e-01 71.6% 85.0%
3480923 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 46.0 4.43e-01 95.1% 75.7%
3419903 304.9.1.47 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.58 44.0 4.44e-01 85.3% 82.0%
4142128 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 48.0 4.90e-01 100.0% 94.0%
3273510 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 45.0 2.82e-01 88.2% 60.6%
5046293 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.56 44.0 4.59e-01 95.1% 95.6%
3424438 304.9.1.47 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.56 43.0 4.42e-01 88.2% 86.0%
3599549 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.55 42.0 4.40e-01 93.1% 88.4%
3270137 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.55 42.0 4.01e-01 95.1% 70.8%
4973396 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.54 48.0 3.98e-01 98.0% 62.2%
4248005 304.11.1.2 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › SAT 0.53 39.0 4.22e-01 91.2% 95.3%
3416938 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 45.0 4.44e-01 100.0% 95.7%
4028770 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 42.0 4.46e-01 95.1% 97.8%
4204243 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.52 43.0 2.88e-01 94.1% 62.9%
4986600 304.8.1.12 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.51 45.0 4.32e-01 98.0% 84.2%
3815555 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.51 43.0 3.99e-01 96.1% 78.5%
3629194 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.51 45.0 2.78e-01 100.0% 49.8%
D11 medium residues 1053-1143
PDB
Domain cluster: rep: DNA-directed_RNA_polymerase_subunit_alpha__YP_004346982__Lausannevirus__999883__D644-663_708-806