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100K

Euk-Vir

Fowl_aviadenovirus_5

100K__YP_007985657__Fowl_aviadenovirus_5__172861

Identity

Accession:
YP_007985657 ↗
Protein ID:
100K
Kingdom:
euk

Quality

63.3 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Aviadenovirus› Fowl_aviadenovirus_5

TaxID: 172861

Cluster

View cluster (53 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-93
PDB
Domain cluster: rep: hexon_assembly_protein_100K__YP_006383567__Goose_adenovirus_4__1193422__D5-84
D2 high residues 342-399
PDB
D3 medium residues 406-416_593-638_727-753
PDB
Domain cluster: rep: hexon_assembly_protein_100K__YP_009047105__Pigeon_adenovirus_1__764030__D372-438_558-569
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02438.22 best Adeno_100 72.4 3.40e-20 67.9% 8.3%
PF02438.22 Adeno_100 26.5 2.60e-06 33.3% 4.5%
D4 medium residues 538-592
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02438.22 best Adeno_100 46.5 2.40e-12 100.0% 9.1%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j78A05 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.71 54.0 5.27e-01 81.8% 81.7%
7wj9A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.71 58.0 3.61e-01 90.9% 90.7%
7cyuA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.68 46.0 4.55e-01 70.9% 66.7%
1dmhA00 2.60.130.10 Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase 0.66 50.0 3.15e-01 81.8% 15.5%
2o1eB01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.66 45.0 3.24e-01 70.9% 32.5%
1icrA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.66 49.0 3.31e-01 81.8% 21.8%
1zv1A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.65 47.0 4.66e-01 76.4% 72.9%
3t38A01 1.10.8.1060 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain 0.65 47.0 4.39e-01 78.2% 62.0%
4fd4A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 45.0 3.01e-01 74.5% 34.4%
6xgzE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 55.0 3.58e-01 98.2% 57.7%
1l8nA03 3.90.1330.10 Alpha Beta › Alpha-Beta Complex › Alpha-d-glucuronidase, C-terminal Domain › Alpha-glucuronidase, C-terminal domain 0.64 53.0 3.69e-01 98.2% 31.2%
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.63 53.0 3.83e-01 94.5% 83.4%
1z8fA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 52.0 4.00e-01 94.5% 48.8%
1l1lA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.60 49.0 2.94e-01 100.0% 64.0%
3t57A02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.58 39.0 3.54e-01 80.0% 50.7%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.05e-01 90.9% 72.0%
2fe1A00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.56 42.0 3.19e-01 81.8% 58.5%
3cx5A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.56 44.0 2.97e-01 89.1% 75.8%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.52 45.0 4.01e-01 98.2% 70.9%
2iexA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.52 40.0 4.12e-01 94.5% 94.1%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3213862 4095.1.1.1 ↗ alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.73 54.0 3.49e-01 80.0% 26.8%
4420776 3492.1.1.1 ↗ a+b two layers › Chromosome partition protein mukE N-terminal domain › Chromosome partition protein mukE N-terminal domain › Chromosome partition protein mukE N-terminal domain › MukE 0.72 53.0 3.48e-01 78.2% 32.7%
4420150 101.1.2.58 ↗ alpha arrays › HTH › HTH › winged helix domain › MukE 0.72 53.0 3.92e-01 78.2% 53.3%
3660913 3826.1.1.0 ↗ alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.70 53.0 4.46e-01 81.8% 54.4%
3679700 601.33.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.69 54.0 4.24e-01 83.6% 42.6%
3689634 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.67 53.0 3.53e-01 89.1% 21.3%
3928838 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.66 50.0 4.49e-01 83.6% 72.5%
3427404 3930.1.1.10 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › DUF5587 0.65 46.0 2.89e-01 74.5% 72.4%
3239895 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.65 52.0 3.41e-01 89.1% 33.8%
3415144 3223.1.1.1 ↗ beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC 0.64 49.0 2.87e-01 83.6% 11.9%
4965680 2484.1.1.330 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF460 0.64 52.0 3.82e-01 94.5% 32.3%
3722689 148.1.1.12 ↗ alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP 0.64 56.0 4.37e-01 100.0% 80.0%
3613230 309.1.1.4 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C 0.63 45.0 3.02e-01 76.4% 50.7%
3688370 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 52.0 2.97e-01 90.9% 52.3%
3635451 2003.1.1.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.63 45.0 2.82e-01 80.0% 12.9%
1841237 309.1.1.10 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › PqqF_C_3 0.62 46.0 3.20e-01 78.2% 84.9%
3036753 397.7.1.0 ↗ few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 0.61 41.0 4.14e-01 70.9% 69.6%
4031211 1075.3.1.4 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1+BPD_transp_1_N 0.60 51.0 3.27e-01 100.0% 20.3%
5006804 2007.1.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.60 44.0 3.10e-01 94.5% 22.1%
3910548 5001.1.1.126 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › PF25987 0.60 52.0 3.31e-01 100.0% 67.7%
3515233 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 42.0 2.85e-01 100.0% 68.8%