100K_protein

Euk-Vir

Bovine_atadenovirus_D

100K_protein__NP_077400__Bovine_atadenovirus_D__130499

Identity

78.6 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Barthadenovirus› Bovine_atadenovirus_D

TaxID: 130499

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 473-563

PDB

Domain cluster: rep: p100K__YP_009704134__Bottlenose_dolphin_adenovirus_1__1714377__D518-591

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	109.8	1.60e-31	100.0%	15.2%

D2 medium residues 121-176_310-331_391-427

PDB

Domain cluster: rep: hexon_assembly_protein_100K__NP_040528__Human_mastadenovirus_C__129951__D157-224_243-286_500-563

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	50.1	1.90e-13	50.4%	9.3%
PF02438.22	Adeno_100	51.4	7.90e-14	33.9%	6.4%
PF02438.22	Adeno_100	25.7	4.50e-06	21.7%	3.7%

D3 medium residues 177-239_332-355

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3a06B03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.65	49.0	4.89e-01	100.0%	79.5%
2qz4A02	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.58	36.0	3.98e-01	100.0%	79.7%
6lumD01	1.20.1300.10	Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit	0.53	34.0	3.03e-01	72.4%	44.0%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3601614	1128.1.1.0 ↗	alpha bundles › LYR protein › LYR protein › LYR protein	0.60	44.0	4.43e-01	98.9%	75.6%

D4 medium residues 240-309_356-390_428-451

PDB

Domain cluster: rep: 100K__YP_009325348__Bat_mastadenovirus_G__2015376__D293-384_422-438_476-510

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	96.2	2.10e-27	56.6%	11.8%