100_kDa_protein

Euk-Vir

red_squirrel_adenovirus_1

100_kDa_protein__YP_009389502__red_squirrel_adenovirus_1__2773314

Identity

73.5 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› red_squirrel_adenovirus_1

TaxID: 2773314

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 85-137

PDB

D2 medium residues 138-171_196-239

PDB

Domain cluster: rep: hexon_assembly_protein_100K__NP_040927__Human_mastadenovirus_A__129875__D157-206_225-250

D3 medium residues 240-255_295-541

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	244.3	2.90e-72	98.5%	42.8%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6fakA02	1.10.246.10	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 ›	0.57	17.0	2.99e-01	77.6%	79.0%
4id0A02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.52	21.0	2.97e-01	83.3%	75.9%
3ctwB00	1.10.8.930	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Protein of unknown function DUF1465	0.51	21.0	3.14e-01	74.1%	84.2%
1hs7A00	1.20.58.70	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.50	21.0	3.20e-01	87.5%	96.9%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3445735	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.53	27.0	2.99e-01	76.0%	56.3%
3913487	604.1.1.124 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6	0.51	21.0	3.10e-01	86.3%	84.5%
4344324	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.50	34.0	3.62e-01	93.5%	75.7%
4276077	5050.1.1.60 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_3	0.50	31.0	3.48e-01	93.5%	77.6%
5074726	633.10.1.0 ↗	alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like	0.50	17.0	2.83e-01	81.4%	84.7%

D4 medium residues 551-642

PDB

Domain cluster: rep: 100K__YP_009174953__Simian_adenovirus_8__413258__D559-661

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	70.5	1.30e-19	100.0%	14.5%