100k

Euk-Vir

Deer_mastadenovirus_B

100k__YP_009373250__Deer_mastadenovirus_B__2170000

Identity

69.0 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Deer_mastadenovirus_B

TaxID: 2170000

View cluster (53 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 205-236_435-450_544-588

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	47.2	1.40e-12	55.9%	7.4%
PF02438.22	Adeno_100	39.7	2.70e-10	49.5%	5.9%

D2 medium residues 237-316

PDB

Domain cluster: rep: 100K__YP_009174953__Simian_adenovirus_8__413258__D149-260

D3 medium residues 317-334_352-403

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2lpeA01	6.10.140.1120	Special › Helix non-globular › Helix Hairpins ›	0.51	42.0	4.07e-01	91.4%	87.2%
4nqwA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.50	38.0	4.00e-01	84.3%	95.3%
2pexA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.50	35.0	2.89e-01	74.3%	41.2%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3994340	605.1.1.229 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Piezo_TM1-24	0.61	49.0	4.37e-01	88.6%	89.0%
4466203	192.7.1.3 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N	0.60	51.0	4.77e-01	95.7%	76.5%
5010738	101.1.2.30 ↗	alpha arrays › HTH › HTH › winged helix domain › TrmB	0.59	42.0	3.59e-01	75.7%	99.2%
3283117	101.1.1.5 ↗	alpha arrays › HTH › HTH › Three-helical HTH › TetR_N	0.59	43.0	4.16e-01	81.4%	70.0%
4674817	101.1.1.31 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4	0.53	42.0	3.22e-01	88.6%	38.3%

D4 medium residues 633-646_663-728

PDB

Domain cluster: rep: 100K__YP_009174953__Simian_adenovirus_8__413258__D559-661

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	50.3	1.60e-13	96.2%	11.1%