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103L

Euk-Vir

Cherax_quadricarinatus_iridovirus

103L__YP_009552384__Cherax_quadricarinatus_iridovirus__2035708

Identity

Accession:
YP_009552384 ↗
Protein ID:
103L
Kingdom:
euk

Quality

68.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Decapodiridovirus› Cherax_quadricarinatus_iridovirus

TaxID: 2035708

Cluster

View cluster (48 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 143-287_443-464
PDB
Domain cluster: rep: hypothetical_protein_MIV024R__YP_654596__Invertebrate_iridescent_virus_3__345201__D105-246
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00112.30 best Peptidase_C1 45.6 1.30e-11 83.2% 49.1%
D2 medium residues 288-348_364-375_424-442
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sp4B00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 57.0 4.28e-01 100.0% 47.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3244679 219.1.1.1 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.69 65.0 4.19e-01 100.0% 36.2%
4960361 219.1.1.1 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.62 56.0 3.97e-01 100.0% 42.1%
3495032 219.1.1.1 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.61 58.0 4.25e-01 100.0% 45.6%
3433434 219.1.1.1 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.60 55.0 4.15e-01 100.0% 48.4%
3601553 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.53 49.0 3.26e-01 100.0% 42.4%
D3 medium residues 349-363_376-423
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00112.30 best Peptidase_C1 30.5 5.20e-07 82.5% 12.3%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4oelB00 2.40.50.170 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C 0.82 49.0 4.76e-01 76.2% 55.1%
3pnrA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 48.0 3.24e-01 88.9% 27.9%
4uhcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 36.0 2.41e-01 74.6% 36.7%
4gq1A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 35.0 2.27e-01 76.2% 40.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4024702 219.1.1.1 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.63 52.0 3.44e-01 88.9% 26.3%
3226605 219.1.1.1 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.63 51.0 3.60e-01 88.9% 31.0%
3715951 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.63 39.0 3.06e-01 76.2% 31.2%
4069101 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.53 38.0 3.42e-01 82.5% 89.0%
4452931 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.52 38.0 3.36e-01 82.5% 87.6%
3965428 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.50 40.0 3.51e-01 93.7% 88.6%