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110R
Euk-VirYaba_monkey_tumor_virus
110R__NP_938365__Yaba_monkey_tumor_virus__38804
Identity
- Accession:
- NP_938365 ↗
- Protein ID:
- 110R
- Kingdom:
- euk
Quality
81.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Yatapoxvirus›
Yaba_monkey_tumor_virus
TaxID: 38804
Cluster
View cluster (178 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 288-460
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 34.6 | 2.80e-08 | 65.9% | 90.9% |
D2
medium
residues 1-54
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ef1A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 46.0 | 4.10e-01 | 77.8% | 69.6% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.58 | 42.0 | 3.83e-01 | 81.5% | 98.7% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 43.0 | 4.10e-01 | 88.9% | 98.5% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 39.0 | 3.88e-01 | 81.5% | 93.2% |
| 1w1oA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.55 | 44.0 | 3.50e-01 | 96.3% | 87.4% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 37.0 | 3.44e-01 | 81.5% | 92.4% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.52 | 40.0 | 3.37e-01 | 96.3% | 97.4% |
| 3ol0B00 | 6.20.90.30 | Special › Other non-globular › SH3 type barrels. › | 0.51 | 34.0 | 3.64e-01 | 83.3% | 95.1% |
| 5lp7E01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 41.0 | 2.92e-01 | 100.0% | 96.6% |
| 1uxyA01 | 3.90.78.10 | Alpha Beta › Alpha-Beta Complex › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1 › UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain | 0.50 | 43.0 | 3.36e-01 | 100.0% | 71.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3197747 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 43.0 | 3.70e-01 | 83.3% | 95.8% |
| 4359892 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.57 | 44.0 | 3.96e-01 | 88.9% | 82.5% |
| 3731934 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.57 | 40.0 | 2.39e-01 | 77.8% | 55.9% |
| 3784017 | 2485.1.1.29 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF1687 | 0.52 | 43.0 | 3.14e-01 | 98.1% | 81.2% |
| 3256151 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.52 | 37.0 | 2.13e-01 | 75.9% | 22.1% |
| 3503277 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 36.0 | 3.43e-01 | 74.1% | 93.8% |
| 4401263 | 865.1.1.1 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 | 0.51 | 40.0 | 2.91e-01 | 100.0% | 87.6% |
| 2507442 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 40.0 | 2.88e-01 | 90.7% | 69.2% |
| 3615606 | 3447.1.1.1 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ERG4_ERG24 | 0.50 | 36.0 | 2.49e-01 | 77.8% | 53.5% |
| 3384159 | 11.1.1.720 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IG_AIR9 | 0.50 | 36.0 | 3.10e-01 | 79.6% | 78.9% |
D3
medium
residues 106-128_203-250
Domain cluster:
rep: hypothetical_protein_VARVgp122__NP_042166__Variola_virus__10255__D95-132_210-254
D4
medium
residues 129-202
Domain cluster:
rep: DNA_helicase,_transcritional_elongation__NP_659682__Sheeppox_virus__10266__D145-204