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12.5K

Euk-Vir

Bat_adenovirus_2

12.5K__YP_004782116__Bat_adenovirus_2__696069

Identity

Accession:
YP_004782116 ↗
Protein ID:
12.5K
Kingdom:
euk

Quality

80.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 55-116
PDB
Domain cluster: representative
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yh6D00 3.30.530.50 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.72 60.0 4.97e-01 93.5% 98.2%
1skoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.69 51.0 4.15e-01 79.0% 94.0%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 59.0 4.57e-01 100.0% 88.7%
2xstA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 58.0 4.45e-01 98.4% 80.5%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.67 56.0 4.34e-01 96.8% 94.6%
5ja2A01 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.66 55.0 3.70e-01 96.8% 74.3%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 57.0 4.39e-01 98.4% 86.7%
2gnxA02 3.30.450.240 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.66 47.0 3.97e-01 77.4% 99.1%
3dbaA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.65 47.0 3.53e-01 79.0% 87.7%
7emyA03 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.65 55.0 3.68e-01 98.4% 75.3%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.65 47.0 3.89e-01 79.0% 95.0%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 56.0 4.14e-01 100.0% 75.7%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 5.14e-01 95.2% 82.7%
4mt1A03 3.30.70.1320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like 0.65 54.0 4.78e-01 100.0% 88.8%
5t0oA03 3.30.70.1320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like 0.65 54.0 4.74e-01 100.0% 89.1%
7jtjA01 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.64 54.0 3.71e-01 98.4% 82.2%
2f7lA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.64 51.0 4.77e-01 95.2% 100.0%
3wx4A00 3.30.70.2770 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 53.0 4.68e-01 98.4% 82.7%
5bmnA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.63 51.0 4.74e-01 93.5% 97.6%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 52.0 4.17e-01 96.8% 95.7%
1xp4A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.63 43.0 2.83e-01 71.0% 99.6%
3mmhA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.63 46.0 3.48e-01 80.6% 75.4%
4wxaA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.63 52.0 4.80e-01 98.4% 86.9%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.63 46.0 3.85e-01 80.6% 96.5%
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 52.0 4.17e-01 96.8% 91.8%
5l09B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.62 46.0 3.47e-01 80.6% 94.5%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 54.0 4.02e-01 100.0% 71.3%
5t3eB02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.62 53.0 3.61e-01 98.4% 82.3%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 51.0 4.13e-01 96.8% 95.5%
7jsnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.62 45.0 3.25e-01 80.6% 85.9%
2cryA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 54.0 4.61e-01 98.4% 68.6%
2lu1A00 3.30.70.2370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 50.0 4.60e-01 96.8% 93.3%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.61 42.0 3.26e-01 72.6% 61.7%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 50.0 4.10e-01 98.4% 95.5%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.61 43.0 3.34e-01 79.0% 85.9%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 45.0 3.82e-01 83.9% 89.5%
4gw9A01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 44.0 3.12e-01 80.6% 74.9%
1rwhA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.60 44.0 3.76e-01 98.4% 44.7%
5l10B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.60 43.0 3.31e-01 80.6% 82.9%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 49.0 3.92e-01 95.2% 91.3%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.60 50.0 4.19e-01 96.8% 86.0%
2l8oA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 46.0 3.57e-01 85.5% 86.1%
6baoA03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.60 43.0 3.38e-01 80.6% 79.5%
4dmzA02 3.30.70.2880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 50.0 3.99e-01 100.0% 70.1%
4boeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 49.0 3.74e-01 95.2% 82.5%
2ex2A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 41.0 2.86e-01 77.4% 98.4%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 48.0 3.67e-01 98.4% 83.8%
3o5yB00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.58 42.0 3.34e-01 80.6% 92.5%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 4.35e-01 95.2% 88.2%
6cc0A01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.58 41.0 3.17e-01 79.0% 87.2%
1vqzA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 45.0 3.13e-01 90.3% 69.0%
2qa1A02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 4.31e-01 93.5% 84.8%
5t8uB01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 47.0 3.19e-01 95.2% 61.1%
2l9pA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 3.51e-01 96.8% 86.6%
1x5mA01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 41.0 3.63e-01 83.9% 79.2%
5dzxA02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.56 46.0 3.98e-01 96.8% 72.0%
2vo8A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 3.68e-01 96.8% 44.4%
1kvkA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.56 45.0 3.59e-01 98.4% 92.6%
6g20A01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.56 40.0 2.90e-01 79.0% 75.4%
6efyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.09e-01 96.8% 72.4%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 45.0 4.14e-01 98.4% 84.1%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 44.0 4.10e-01 93.5% 85.5%
2ea3A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 38.0 3.54e-01 74.2% 54.8%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 3.83e-01 96.8% 69.6%
1i82A00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 42.0 3.16e-01 95.2% 61.9%
2ednA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.65e-01 96.8% 62.7%
2j3tD01 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 42.0 3.40e-01 100.0% 49.3%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5073891 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.74 61.0 5.25e-01 91.9% 97.0%
3992152 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.71 48.0 3.63e-01 71.0% 68.0%
4188535 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.70 59.0 5.48e-01 96.8% 85.0%
4182456 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.68 58.0 5.27e-01 98.4% 94.1%
4012187 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.68 57.0 4.14e-01 96.8% 91.9%
4991988 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.67 57.0 5.52e-01 96.8% 97.1%
5075159 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.67 57.0 4.19e-01 96.8% 97.0%
4120093 323.1.1.5 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.66 56.0 3.72e-01 96.8% 73.0%
4976523 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 45.0 3.50e-01 71.0% 64.3%
5077539 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 49.0 4.00e-01 80.6% 98.3%
4991268 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.65 45.0 3.24e-01 72.6% 85.1%
3959863 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 53.0 4.16e-01 95.2% 95.2%
3844176 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.65 55.0 4.23e-01 100.0% 81.0%
4319690 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 44.0 3.61e-01 72.6% 87.5%
4929825 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 47.0 3.84e-01 79.0% 93.3%
3971924 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.64 54.0 4.96e-01 98.4% 100.0%
5000881 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 47.0 3.59e-01 80.6% 76.8%
3628935 1181.1.1.0 0.64 43.0 4.30e-01 71.0% 69.2%
3526003 304.9.1.87 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF30891 0.64 53.0 4.51e-01 100.0% 95.7%
1447918 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.64 53.0 5.09e-01 95.2% 84.9%
1644767 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.64 51.0 4.74e-01 96.8% 82.8%
3844858 220.1.1.39 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZFYVE21_C 0.64 43.0 3.25e-01 71.0% 56.5%
4218835 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.63 52.0 4.56e-01 91.9% 84.2%
5069591 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.63 43.0 3.24e-01 71.0% 74.2%
4948155 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 46.0 3.69e-01 80.6% 87.7%
5045027 223.1.1.23 a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 0.62 45.0 3.34e-01 80.6% 75.6%
3999005 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.62 44.0 4.34e-01 75.8% 78.5%
6331 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.61 50.0 4.09e-01 98.4% 94.7%
2732123 323.1.1.5 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.61 49.0 3.40e-01 98.4% 75.7%
3177235 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 41.0 3.21e-01 71.0% 86.4%
5049789 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 42.0 3.43e-01 74.2% 99.2%
4537439 323.1.1.5 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.60 51.0 3.42e-01 98.4% 74.5%
4291364 223.1.1.3 a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.60 44.0 3.38e-01 80.6% 92.9%
4995617 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.60 49.0 4.49e-01 96.8% 97.8%
1907312 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.59 43.0 3.26e-01 80.6% 82.0%
4831470 304.107.1.0 a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain 0.59 48.0 3.31e-01 96.8% 34.8%
5075282 331.6.1.0 a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain 0.59 45.0 4.38e-01 85.5% 97.1%
3621921 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.59 51.0 4.87e-01 98.4% 94.5%
4996444 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 46.0 3.85e-01 98.4% 47.8%
5078870 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.58 42.0 3.39e-01 80.6% 87.9%
5047756 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 45.0 3.34e-01 87.1% 95.9%
5005970 304.51.1.15 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cmr1_C 0.56 43.0 3.52e-01 88.7% 88.4%
3879109 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.55 41.0 3.57e-01 83.9% 52.9%
4999190 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 47.0 3.72e-01 100.0% 90.0%
4034506 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 38.0 3.07e-01 82.3% 74.8%
4019036 304.3.1.15 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › PF31052 0.53 42.0 4.14e-01 98.4% 91.4%
5052027 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 46.0 3.68e-01 100.0% 92.8%
5053568 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 3.56e-01 100.0% 91.1%
4997750 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 3.55e-01 100.0% 90.4%
5072327 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 3.55e-01 100.0% 85.9%
5045959 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 46.0 3.79e-01 100.0% 59.1%
3267300 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.51 45.0 3.54e-01 100.0% 49.2%
5016069 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.51 41.0 2.94e-01 93.5% 69.8%
3986112 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 35.0 2.46e-01 85.5% 20.9%
3783468 223.2.1.9 a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.50 42.0 3.23e-01 95.2% 94.0%