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121_T_antigen

Euk-Vir

Sus_scrofa_polyomavirus_1

121_T_antigen__YP_009552105__Sus_scrofa_polyomavirus_1__1680894

Identity

Accession:: YP_009552105 ↗
Protein ID:: 121_T_antigen
Kingdom:: euk

Quality

80.6 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Alphapolyomavirus› Sus_scrofa_polyomavirus_1

TaxID: 1680894

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-120

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3nrxA00	1.20.58.1520	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.76	60.0	5.87e-01	82.5%	92.7%
1gh6A01	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.74	54.0	5.71e-01	74.6%	92.1%
3g67A00	1.10.287.950	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein	0.66	45.0	3.64e-01	74.6%	37.6%
2rkkA01	1.25.40.270	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1	0.61	42.0	3.82e-01	70.2%	87.8%
4hehA01	1.10.1240.10	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain	0.60	40.0	4.56e-01	70.2%	92.8%
8b9zK01	1.10.287.3510	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.59	41.0	4.55e-01	82.5%	91.2%
1txdA01	1.20.900.10	Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain	0.59	49.0	3.98e-01	93.0%	91.3%
3ajmB02	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.59	44.0	4.19e-01	79.8%	67.7%
7qx4A01	1.20.190.10	Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain	0.57	46.0	3.67e-01	87.7%	70.5%
4p9tA01	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.54	39.0	3.84e-01	73.7%	71.7%
4w8pA02	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.51	40.0	3.84e-01	84.2%	73.1%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3306783	7111.1.1.1 ↗	alpha bundles › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiq_cyt_C_chap	0.66	47.0	3.79e-01	72.8%	49.3%
4028408	7111.1.1.1 ↗	alpha bundles › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiq_cyt_C_chap	0.65	46.0	3.68e-01	72.8%	47.3%
3615974	3755.3.1.288 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › LMBR1	0.62	39.0	3.75e-01	74.6%	54.9%
3294729	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.62	43.0	3.71e-01	74.6%	46.9%
3561370	106.1.1.10 ↗	alpha arrays › Globin-like › Globin-like › Globin-like › BCD_RFX	0.61	43.0	4.10e-01	73.7%	83.6%
3482466	3883.1.1.1 ↗	alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf	0.56	43.0	3.59e-01	87.7%	46.0%
4139499	2004.1.1.293 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15	0.55	49.0	3.18e-01	100.0%	29.2%
3601554	4121.1.1.0 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like	0.53	46.0	3.96e-01	98.2%	88.9%