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125R
Euk-VirCherax_quadricarinatus_iridovirus
125R__YP_009552406__Cherax_quadricarinatus_iridovirus__2035708
Identity
- Accession:
- YP_009552406 ↗
- Protein ID:
- 125R
- Kingdom:
- euk
Quality
84.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Decapodiridovirus›
Cherax_quadricarinatus_iridovirus
TaxID: 2035708
Cluster
View cluster (65 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 259-319
Domain cluster:
rep: IMGVR_UViG_3300002053_001336-3300002053-SMTZ23_100214334__D204-271
D2
medium
residues 21-256
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00752.24 best | XPG_N | 37.8 | 3.00e-09 | 33.1% | 83.2% |
| PF00867.24 | XPG_I | 39.7 | 6.90e-10 | 28.0% | 80.7% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5v07Z01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.85 | 69.0 | 7.45e-01 | 100.0% | 95.6% |
| 1xo1A02 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.72 | 41.0 | 5.03e-01 | 93.2% | 83.6% |
| 1a76A01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.70 | 58.0 | 6.20e-01 | 100.0% | 96.1% |
| 1o4wA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.64 | 33.0 | 4.46e-01 | 87.7% | 92.8% |
| 2oqrA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 23.0 | 3.82e-01 | 86.4% | 98.8% |
| 5vlcA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.59 | 33.0 | 4.03e-01 | 90.7% | 82.3% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 33.0 | 4.37e-01 | 88.6% | 99.2% |
| 3fhlA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 32.0 | 4.12e-01 | 91.9% | 94.2% |
| 2f9sB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 27.0 | 3.49e-01 | 90.3% | 78.7% |
| 2l5oA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 28.0 | 3.44e-01 | 91.1% | 73.3% |
| 3ewlB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 26.0 | 3.40e-01 | 90.7% | 80.3% |
| 3fkfD00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 27.0 | 3.42e-01 | 90.3% | 81.8% |
| 6oibA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 30.0 | 3.66e-01 | 86.0% | 90.7% |
| 5jioA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 38.0 | 4.02e-01 | 95.8% | 87.6% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3193336 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.90 | 46.0 | 6.64e-01 | 79.2% | 100.0% |
| 4001799 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.87 | 70.0 | 6.76e-01 | 99.6% | 74.5% |
| 3472483 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.87 | 70.0 | 6.27e-01 | 100.0% | 62.9% |
| 4237276 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.86 | 71.0 | 7.56e-01 | 100.0% | 94.8% |
| 3170744 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.85 | 70.0 | 6.37e-01 | 100.0% | 67.1% |
| 4020826 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.85 | 69.0 | 6.75e-01 | 100.0% | 77.3% |
| 3937112 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.85 | 70.0 | 6.78e-01 | 100.0% | 77.2% |
| 3744314 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.84 | 69.0 | 6.47e-01 | 100.0% | 71.6% |
| 3882124 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.84 | 61.0 | 6.41e-01 | 100.0% | 80.5% |
| 3808902 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.84 | 59.0 | 6.79e-01 | 99.2% | 93.3% |
| 4028970 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.84 | 70.0 | 6.69e-01 | 100.0% | 76.4% |
| 3267380 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.84 | 69.0 | 7.11e-01 | 100.0% | 88.4% |
| 4023084 | 2006.1.4.28 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › MKT1_N | 0.84 | 70.0 | 6.75e-01 | 100.0% | 77.7% |
| 3484303 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.83 | 62.0 | 6.95e-01 | 100.0% | 93.7% |
| 3823952 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.83 | 67.0 | 6.39e-01 | 97.0% | 72.8% |
| 3784928 | 2006.1.4.32 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N, MKT1_N | 0.83 | 64.0 | 6.35e-01 | 100.0% | 75.9% |
| 3498626 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.83 | 67.0 | 6.51e-01 | 100.0% | 76.5% |
| 3610118 | 2006.1.4.46 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N, XPG_I, XPG_I_2 | 0.82 | 70.0 | 6.51e-01 | 100.0% | 72.5% |
| 4426402 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.82 | 69.0 | 7.14e-01 | 100.0% | 91.8% |
| 3733625 | 2006.1.4.28 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › MKT1_N | 0.82 | 67.0 | 6.60e-01 | 100.0% | 79.2% |
| 5055638 | 2006.1.4.19 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N | 0.82 | 68.0 | 7.23e-01 | 100.0% | 95.2% |
| 4028436 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.82 | 65.0 | 6.31e-01 | 100.0% | 74.9% |
| 3335892 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.82 | 70.0 | 6.50e-01 | 100.0% | 73.6% |
| 3701288 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.82 | 69.0 | 7.23e-01 | 99.6% | 93.6% |
| None | — | 0.82 | 69.0 | 7.23e-01 | 99.6% | 93.6% | |
| 3913336 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.81 | 58.0 | 6.59e-01 | 99.2% | 92.4% |
| 3874759 | 2006.1.4.35 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PF27242 | 0.81 | 67.0 | 5.92e-01 | 100.0% | 61.5% |
| 4395983 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.81 | 71.0 | 7.37e-01 | 99.6% | 95.5% |
| 4946948 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.81 | 71.0 | 7.39e-01 | 100.0% | 95.9% |
| 3755557 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.81 | 67.0 | 6.68e-01 | 99.6% | 82.9% |
| 4956546 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.81 | 69.0 | 7.23e-01 | 99.6% | 95.3% |
| 3875510 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.81 | 66.0 | 7.00e-01 | 100.0% | 93.8% |
| 4933316 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.81 | 70.0 | 7.24e-01 | 100.0% | 93.8% |
| 3919202 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.81 | 66.0 | 5.49e-01 | 99.2% | 52.4% |
| 3477276 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.80 | 74.0 | 7.46e-01 | 99.2% | 94.9% |
| 4024047 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.80 | 71.0 | 7.23e-01 | 100.0% | 93.0% |
| 3581443 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.80 | 69.0 | 6.24e-01 | 100.0% | 68.9% |
| 4927168 | 2006.1.4.19 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N | 0.80 | 69.0 | 7.22e-01 | 100.0% | 95.9% |
| 5041361 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.79 | 50.0 | 6.22e-01 | 100.0% | 96.8% |
| 4964944 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.79 | 65.0 | 6.94e-01 | 100.0% | 94.8% |
| 3789016 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.79 | 77.0 | 7.07e-01 | 100.0% | 95.9% |
| 4377686 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.79 | 67.0 | 4.65e-01 | 100.0% | 30.6% |
| 3518745 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.79 | 52.0 | 5.38e-01 | 100.0% | 69.8% |
| 4028346 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.79 | 76.0 | 6.83e-01 | 100.0% | 95.5% |
| 3393840 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.78 | 70.0 | 7.13e-01 | 99.6% | 94.8% |
| 4021778 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.78 | 75.0 | 6.94e-01 | 100.0% | 92.4% |
| 4264908 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.78 | 62.0 | 6.56e-01 | 100.0% | 89.8% |
| 3238117 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.77 | 59.0 | 6.52e-01 | 99.6% | 93.8% |
| 3721945 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.77 | 57.0 | 6.48e-01 | 100.0% | 96.2% |
| 3938152 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.77 | 61.0 | 6.61e-01 | 99.2% | 94.1% |
| 3428426 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.77 | 61.0 | 6.61e-01 | 100.0% | 93.7% |
| 3484870 | 2006.1.4.19 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N | 0.76 | 68.0 | 6.76e-01 | 100.0% | 89.6% |
| 3683988 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.76 | 63.0 | 6.68e-01 | 100.0% | 93.5% |
| 3599611 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.76 | 67.0 | 6.21e-01 | 100.0% | 75.1% |
| 3718837 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.76 | 70.0 | 6.34e-01 | 100.0% | 75.0% |
| 3486531 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.75 | 67.0 | 6.45e-01 | 99.6% | 82.7% |
| 3937732 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.75 | 56.0 | 6.26e-01 | 100.0% | 94.2% |
| 4589814 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.75 | 70.0 | 6.96e-01 | 100.0% | 93.5% |
| 5044998 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.74 | 60.0 | 6.49e-01 | 100.0% | 95.1% |
| 3868746 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.74 | 63.0 | 5.63e-01 | 99.6% | 65.3% |
| 3893248 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.74 | 63.0 | 4.72e-01 | 99.6% | 39.8% |
| 3627555 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.74 | 59.0 | 6.35e-01 | 99.6% | 94.1% |
| 5072240 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.73 | 59.0 | 6.45e-01 | 99.6% | 98.0% |
| 3205760 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.72 | 69.0 | 6.70e-01 | 100.0% | 95.0% |
| 3182237 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.72 | 57.0 | 6.19e-01 | 100.0% | 95.0% |
| 3223707 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.72 | 64.0 | 6.36e-01 | 100.0% | 90.8% |
| 142326 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.72 | 62.0 | 6.38e-01 | 100.0% | 93.4% |
| 3520565 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.70 | 64.0 | 6.44e-01 | 100.0% | 94.5% |
| 4979225 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.69 | 56.0 | 6.13e-01 | 99.2% | 98.0% |
| 3613309 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.68 | 60.0 | 6.14e-01 | 100.0% | 94.7% |
| 5049771 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.67 | 60.0 | 6.14e-01 | 100.0% | 95.6% |
| 4028492 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.67 | 58.0 | 5.88e-01 | 100.0% | 92.6% |
| 3641274 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.66 | 63.0 | 5.89e-01 | 99.2% | 95.7% |
| 3781390 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.65 | 55.0 | 5.75e-01 | 99.2% | 94.0% |
| 3176999 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.61 | 56.0 | 5.62e-01 | 100.0% | 94.9% |
| 4973771 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.58 | 37.0 | 4.10e-01 | 98.7% | 77.9% |