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158kDa_replicase

Euk-Vir

Botrytis_virus_X

158kDa_replicase__NP_932306__Botrytis_virus_X__174142

Identity

Accession:
NP_932306 ↗
Protein ID:
158kDa_replicase
Kingdom:
euk

Quality

75.9 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Tymovirales› Alphaflexiviridae› Botrexvirus› Botrytis_virus_X

TaxID: 174142

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 68-266
PDB
Domain cluster: rep: uncovered_polypeptide_polyprotein__YP_001086452_0-758__Chrysanthemum_virus_B__12165__D72-292
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01660.23 best Vmethyltransf 167.9 4.20e-49 99.5% 68.2%
D2 medium residues 1-67
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_010087744__Euonymus_yellow_mottle_associated_virus__2586645__D1-67
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4o92A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 47.0 4.11e-01 100.0% 82.9%
4mo7A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 42.0 3.42e-01 98.5% 71.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3711742 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 46.0 3.93e-01 92.5% 44.3%
3199415 378.1.1.9 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 0.57 43.0 2.96e-01 82.1% 50.0%
D3 medium residues 272-401
PDB
Domain cluster: rep: RNA_dependent_RNA_polymerase__YP_009091814__Yam_virus_X__1503864__D297-399
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01660.23 best Vmethyltransf 30.5 2.80e-07 40.0% 16.7%
D4 medium residues 590-605_657-744_762-777
PDB
Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01443.25 best Viral_helicase1 63.2 4.50e-17 89.2% 36.8%
CATH (80)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b3fX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 71.0 5.05e-01 96.7% 99.7%
3e1sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 65.0 5.28e-01 95.0% 89.6%
3vkwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 63.0 5.97e-01 93.3% 99.3%
1w36D02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 61.0 4.87e-01 91.7% 99.6%
6x50A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 61.0 5.01e-01 90.8% 98.6%
6jimB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 65.0 6.12e-01 98.3% 91.6%
1pjrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 62.0 5.15e-01 95.0% 89.1%
4b3fX03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 64.0 5.34e-01 100.0% 97.5%
3upuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 62.0 5.42e-01 98.3% 86.9%
3upuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 52.0 5.10e-01 80.0% 97.7%
2p6rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 62.0 5.24e-01 98.3% 84.0%
1rifA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 5.06e-01 95.0% 80.2%
2fwrA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 61.0 5.30e-01 98.3% 83.1%
3otxB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.67 52.0 3.97e-01 83.3% 94.6%
4idhA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 61.0 5.03e-01 100.0% 82.7%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 57.0 5.13e-01 94.2% 95.7%
4ceiB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 56.0 4.89e-01 95.0% 100.0%
1yksA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 55.0 4.73e-01 90.8% 91.1%
1u2eA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.64 50.0 3.80e-01 83.3% 84.3%
5rl9B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 55.0 5.13e-01 93.3% 96.0%
2zpaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 58.0 5.60e-01 100.0% 94.1%
3gvpA01 3.40.50.1480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Adenosylhomocysteinase-like 0.63 51.0 4.04e-01 86.7% 64.8%
2avdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 48.0 4.01e-01 81.7% 86.8%
2ocgA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.63 50.0 3.92e-01 83.3% 87.4%
3e1sA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 52.0 4.97e-01 89.2% 91.5%
2wj6A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.63 49.0 4.12e-01 82.5% 80.4%
4ru1A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 48.0 4.56e-01 82.5% 89.9%
1j1iA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 47.0 3.74e-01 80.8% 86.4%
2wtmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 50.0 3.95e-01 85.8% 86.0%
3mwyW04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 57.0 4.34e-01 99.2% 91.8%
4g1vA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.62 46.0 4.42e-01 77.5% 100.0%
1w36C01 3.40.50.10930 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 54.0 4.41e-01 95.0% 100.0%
2o2gA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 48.0 4.00e-01 83.3% 80.6%
5jd6A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 49.0 4.02e-01 85.0% 85.8%
7paxA01 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.62 43.0 3.31e-01 70.8% 82.3%
2xblD00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.61 49.0 4.20e-01 85.8% 73.8%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 47.0 3.65e-01 84.2% 88.7%
1w4rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 53.0 5.16e-01 95.0% 99.2%
3oosA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 48.0 3.96e-01 85.8% 86.0%
3h04A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 47.0 3.65e-01 83.3% 85.3%
7qjnA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 48.0 3.75e-01 86.7% 85.0%
1gvhA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.60 44.0 4.17e-01 75.8% 81.7%
1thtA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 48.0 3.68e-01 87.5% 76.5%
3qvmB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 50.0 3.86e-01 91.7% 92.9%
3qi7A01 3.40.50.11400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 46.0 4.34e-01 80.8% 87.6%
8ebtA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 4.71e-01 99.2% 91.1%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 4.39e-01 99.2% 75.9%
4uhcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 49.0 3.79e-01 90.0% 88.5%
1npdB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 44.0 4.15e-01 78.3% 64.4%
3pffA05 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.59 46.0 4.09e-01 82.5% 73.1%
1yc5A01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.59 47.0 4.41e-01 85.8% 90.7%
3v4cA02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.58 45.0 3.84e-01 80.8% 82.7%
4kdcA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 51.0 4.23e-01 97.5% 76.0%
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 51.0 5.01e-01 95.0% 100.0%
1l7aA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 49.0 3.70e-01 95.0% 89.6%
3gg9A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 45.0 4.25e-01 81.7% 75.7%
3qocA00 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.58 40.0 3.96e-01 70.8% 87.6%
1xdwA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 43.0 4.17e-01 79.2% 80.5%
2b8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 50.0 4.77e-01 95.0% 98.6%
1dxyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 44.0 4.26e-01 81.7% 79.7%
5irnA02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.57 36.0 3.99e-01 71.7% 81.7%
1ez0A02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.56 43.0 3.76e-01 81.7% 84.9%
4jbgA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 44.0 4.25e-01 84.2% 92.5%
5tdeA03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.55 44.0 3.81e-01 85.0% 89.9%
1r1dA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 41.0 3.31e-01 78.3% 89.3%
2xuaA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 43.0 3.46e-01 85.8% 88.8%
5irlA02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.55 42.0 3.12e-01 80.8% 73.2%
2pgeA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.54 43.0 3.50e-01 84.2% 72.5%
3k1zA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 41.0 3.81e-01 80.8% 72.4%
2k2qB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 40.0 3.27e-01 79.2% 93.0%
2gzsA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 44.0 3.54e-01 90.8% 85.1%
1pbtA00 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 46.0 3.82e-01 95.8% 99.5%
1ofuX00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 40.0 4.11e-01 81.7% 100.0%
5z87A01 3.20.20.300 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain 0.53 45.0 3.29e-01 95.0% 85.4%
5ol0B01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.53 47.0 4.19e-01 99.2% 85.5%
3flhB00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.53 42.0 4.28e-01 99.2% 86.8%
3nhvC01 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.53 42.0 4.27e-01 98.3% 86.7%
4mixA00 3.90.550.20 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.52 36.0 2.76e-01 85.8% 30.4%
2g2cA00 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.52 38.0 3.54e-01 75.8% 90.7%
2fsxA00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.50 44.0 4.30e-01 97.5% 95.5%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3735988 2004.1.1.522 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_19 0.83 75.0 5.09e-01 95.8% 98.5%
3695651 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.82 73.0 5.00e-01 95.0% 98.2%
3924486 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.81 73.0 4.74e-01 95.8% 95.7%
3240265 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.81 74.0 5.32e-01 97.5% 100.0%
None — 0.81 75.0 5.29e-01 99.2% 86.3%
3936662 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.81 71.0 4.93e-01 93.3% 98.3%
3208390 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.80 72.0 4.82e-01 95.0% 92.9%
3397089 2004.1.1.920 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, AAA_11, AAA_12 0.80 73.0 4.59e-01 99.2% 57.4%
3908064 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.80 73.0 5.21e-01 98.3% 88.8%
3253942 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.80 72.0 5.15e-01 97.5% 90.1%
3801347 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.79 72.0 5.26e-01 96.7% 100.0%
3788919 2004.1.1.505 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 0.79 70.0 4.93e-01 94.2% 100.0%
3560235 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.79 71.0 4.63e-01 96.7% 95.2%
3914297 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.79 72.0 5.12e-01 97.5% 89.3%
5069777 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.79 69.0 5.01e-01 92.5% 99.7%
3921055 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.79 70.0 4.82e-01 94.2% 93.8%
3567663 2004.1.1.185 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 0.79 72.0 4.57e-01 98.3% 54.6%
4964650 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.79 70.0 5.28e-01 95.0% 99.6%
4951117 2004.1.1.205 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.78 67.0 4.86e-01 91.7% 99.4%
4999085 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.78 69.0 5.15e-01 95.0% 100.0%
None — 0.77 70.0 5.12e-01 96.7% 90.7%
3752894 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.77 70.0 4.94e-01 97.5% 92.3%
3193955 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.77 70.0 5.11e-01 97.5% 89.8%
3684643 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.76 69.0 4.70e-01 96.7% 87.4%
3247067 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.76 70.0 4.88e-01 97.5% 98.0%
4046976 2004.1.1.193 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.76 69.0 5.28e-01 96.7% 97.6%
3970064 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 67.0 5.13e-01 95.8% 100.0%
None — 0.75 67.0 5.33e-01 95.8% 91.3%
3589264 2004.1.1.193 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.75 67.0 5.11e-01 96.7% 80.8%
3163821 2004.1.1.193 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.74 67.0 5.16e-01 96.7% 100.0%
3940067 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 66.0 4.72e-01 94.2% 99.4%
2092590 2004.1.1.205 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.74 65.0 5.30e-01 92.5% 97.6%
3965541 2004.1.1.522 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_19 0.74 65.0 4.92e-01 95.0% 89.1%
3286906 2004.1.1.205 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.73 64.0 5.21e-01 93.3% 99.1%
3287999 2004.1.1.193 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.73 65.0 4.93e-01 95.8% 95.2%
4472619 2004.1.1.483 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, AAA_19, UvrD_C 0.72 68.0 3.93e-01 100.0% 47.4%
2512657 2004.1.1.62 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.72 67.0 6.04e-01 99.2% 86.2%
4950790 2004.1.1.49 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.72 67.0 3.94e-01 100.0% 47.9%
1175748 2004.1.1.205 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.72 59.0 5.01e-01 86.7% 93.1%
3783362 2004.1.1.455 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.71 66.0 4.11e-01 100.0% 39.8%
4927000 2008.1.1.217 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UvrD-helicase 0.71 65.0 3.72e-01 99.2% 39.1%
3777175 2004.1.1.203 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.71 59.0 5.18e-01 87.5% 95.3%
3293050 2004.1.1.49 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.71 66.0 4.64e-01 100.0% 81.4%
4227542 2004.1.1.363 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.71 65.0 4.03e-01 100.0% 40.5%
4950774 2004.1.1.49 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.70 62.0 3.84e-01 95.0% 52.7%
3913640 2004.1.1.186 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.70 64.0 5.11e-01 99.2% 87.0%
4968904 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 65.0 4.64e-01 100.0% 87.1%
4439831 2004.1.1.193 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.69 62.0 4.68e-01 96.7% 94.2%
1167709 2004.1.1.193 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.69 63.0 5.44e-01 98.3% 86.5%
4990161 2004.1.1.123 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.68 62.0 4.92e-01 100.0% 70.4%
3964961 2004.1.1.117 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 0.68 62.0 5.14e-01 100.0% 81.9%
4032610 2004.1.1.238 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,ResIII 0.67 62.0 4.14e-01 100.0% 66.4%
3731003 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 61.0 4.94e-01 99.2% 92.0%
3986759 2004.1.1.117 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 0.67 62.0 5.05e-01 100.0% 80.5%
1030910 2004.1.1.120 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.67 60.0 5.03e-01 95.0% 79.0%
3683589 2004.1.1.135 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.67 63.0 4.25e-01 100.0% 42.0%
4977811 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 61.0 5.27e-01 97.5% 81.7%
4679476 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.67 57.0 4.33e-01 90.8% 72.8%
4556018 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.66 61.0 3.98e-01 100.0% 69.1%
4970836 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 60.0 5.02e-01 100.0% 82.9%
3970065 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 54.0 4.82e-01 87.5% 95.8%
None — 0.65 53.0 4.03e-01 86.7% 52.6%
3682236 2004.1.1.496 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.65 56.0 5.01e-01 94.2% 92.9%
5030274 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.65 50.0 3.84e-01 82.5% 77.8%
3081158 7579.1.1.102 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, Hydrolase_4 0.64 50.0 3.97e-01 83.3% 88.5%
5077729 7579.1.1.42 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 0.63 49.0 3.93e-01 83.3% 90.6%
3385675 2004.1.1.298 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase 0.62 53.0 4.95e-01 91.7% 80.0%
4044261 2004.1.1.161 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.61 53.0 4.65e-01 95.8% 82.8%
2982012 2004.1.1.174 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Elong_Iki1 0.59 52.0 4.24e-01 98.3% 76.7%
4257121 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.59 45.0 3.59e-01 81.7% 87.2%
4267942 7524.1.1.0 ↗ a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like 0.58 45.0 3.72e-01 80.8% 75.7%
3298479 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.58 41.0 3.37e-01 74.2% 70.9%
3988979 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 43.0 4.53e-01 79.2% 92.7%
3958699 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 43.0 3.82e-01 80.0% 57.2%
3804936 207.1.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 0.57 43.0 3.47e-01 80.8% 55.5%
4182860 2004.1.1.161 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.56 50.0 4.50e-01 96.7% 86.1%
4341314 2004.1.1.161 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.56 45.0 4.61e-01 92.5% 88.7%
3384522 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.56 43.0 2.96e-01 80.8% 51.2%
3626270 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 42.0 3.25e-01 83.3% 76.0%
3428085 304.112.1.12 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoL2 0.53 40.0 3.47e-01 79.2% 60.0%
3907773 207.1.1.307 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885, PF29594 0.53 40.0 2.93e-01 80.0% 67.9%
3908714 207.1.1.134 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 0.53 41.0 2.84e-01 81.7% 72.9%
3258605 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 42.0 2.85e-01 83.3% 49.8%
None — 0.53 42.0 2.86e-01 83.3% 33.9%
3807584 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 39.0 3.15e-01 78.3% 100.0%
3810649 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 41.0 2.87e-01 83.3% 45.0%
3948974 2007.2.5.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese 0.52 42.0 4.28e-01 98.3% 87.5%
3375488 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 40.0 3.27e-01 81.7% 53.8%
3444615 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.52 40.0 4.00e-01 80.8% 93.3%
3367906 207.1.1.97 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 0.50 37.0 2.83e-01 77.5% 43.1%
D5 medium residues 606-656_745-761
PDB
Domain cluster: representative
D6 medium residues 1119-1152_1204-1274
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
D7 medium residues 1275-1349
PDB
Domain cluster: rep: RNA_dependent_RNA_polymerase__YP_009091814__Yam_virus_X__1503864__D1288-1359