1B_protein_RdRp

Euk-Vir

Blackcurrant_leafroll-associated_virus_1

1B_protein_RdRp__YP_009552057__Blackcurrant_leafroll-associated_virus_1__2292426

Identity

87.5 mean pLDDT

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Closterovirus› Blackcurrant_leafroll-associated_virus_1

TaxID: 2292426

View cluster (450 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 295-371

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase,_partial__YP_009241367__Grapevine_leafroll-associated_virus_13__1815581__D413-491

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00978.27 best	RdRP_2	44.5	1.50e-11	100.0%	17.3%

D2 medium residues 1-116_162-211

PDB

Domain cluster: rep: RdRp,_partial__YP_762622__Strawberry_chlorotic_fleck-associated_virus__399314__D41-159_203-257

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00978.27 best	RdRP_2	76.7	2.40e-21	71.7%	25.7%
PF00978.27	RdRP_2	31.0	1.80e-07	30.7%	10.9%

D3 medium residues 117-161_212-294

PDB

Domain cluster: rep: RNA_dependent_RNA_polymerase,_partial__YP_002364303__Grapevine_leafroll-associated_virus_10__367121__D252-284_355-434

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00978.27 best	RdRP_2	100.7	1.20e-28	65.6%	18.9%

D4 medium residues 376-430

PDB