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1D_VP1_mature_peptide
Euk-VirHepatovirus_A
1D_VP1_mature_peptide__NP_740552__Hepatovirus_A__12092
Identity
- Accession:
- NP_740552 ↗
- Protein ID:
- 1D_VP1_mature_peptide
- Kingdom:
- euk
Quality
66.6
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Picornavirales›
Picornaviridae›
Hepatovirus›
Hepatovirus_A
TaxID: 12092
Cluster
View cluster (38 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 88-155_199-217
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12944.14 best | HAV_VP | 130.7 | 7.50e-38 | 80.5% | 41.4% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.92 | 88.0 | 6.03e-01 | 100.0% | 50.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1405131 | 10.2.1.51 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP | 0.92 | 88.0 | 5.98e-01 | 100.0% | 49.4% |
| 4882964 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.67 | 62.0 | 5.77e-01 | 100.0% | 91.6% |
| 1687950 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.67 | 62.0 | 5.22e-01 | 100.0% | 72.5% |