1a_protein

Euk-Vir

Sambucus_virus_S

1a_protein__YP_009551510__Sambucus_virus_S__2052851

Identity

76.2 mean pLDDT

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Bromoviridae› Bromovirus› Sambucus_virus_S

TaxID: 2052851

View cluster (6 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 98-286

PDB

Domain cluster: rep: methyltransferase_helicase__YP_009104367__Lilac_leaf_chlorosis_virus__722755__D97-204_268-298

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01660.23 best	Vmethyltransf	133.1	1.60e-38	100.0%	58.8%
PF19223.6	Chropara_Vmeth	28.7	1.00e-06	82.0%	25.5%

D2 high residues 307-408_445-467

PDB

D3 high residues 571-671

PDB

Domain cluster: rep: replication-associated_polyprotein_1a__YP_009165996__Privet_ringspot_virus__2169960__D691-782

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12503.14 best	CMV_1a_C	99.7	1.10e-28	76.2%	95.2%

D4 high residues 677-818

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	84.0	2.10e-23	93.0%	52.2%
PF13604.13	AAA_30	31.6	2.00e-07	93.0%	57.6%

D5 high residues 831-964

PDB

Domain cluster: rep: TGB1_protein__NP_619560__Garlic_latent_virus__12458__D129-228

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	53.2	5.30e-14	89.5%	38.6%

D6 medium residues 3-37

PDB