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1b,_partial
Euk-VirMalus_domestica_virus_A
1b,_partial__YP_010087858__Malus_domestica_virus_A__2664236
Identity
- Accession:
- YP_010087858 ↗
- Protein ID:
- 1b,_partial
- Kingdom:
- euk
Quality
86.0
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Closteroviridae›
Velarivirus›
Malus_domestica_virus_A
TaxID: 2664236
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-35_405-504
Domain cluster:
rep: RNA-dependent_RNA_polymerase,_partial__YP_009241367__Grapevine_leafroll-associated_virus_13__1815581__D413-491
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00978.27 best | RdRP_2 | 61.2 | 1.20e-16 | 84.8% | 19.1% |
D2
high
residues 118-236_276-349
Domain cluster:
rep: ORF1b__YP_001816770__Bean_yellow_disorder_virus__267970__D132-368
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00978.27 best | RdRP_2 | 81.3 | 9.40e-23 | 62.2% | 26.8% |
| PF00978.27 | RdRP_2 | 67.5 | 1.50e-18 | 38.9% | 16.8% |
D3
medium
residues 237-275_350-404
Domain cluster:
rep: RNA_dependent_RNA_polymerase,_partial__YP_002364303__Grapevine_leafroll-associated_virus_10__367121__D252-284_355-434
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00978.27 best | RdRP_2 | 63.1 | 3.20e-17 | 58.5% | 12.5% |