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1b
Euk-VirCarrot_yellow_leaf_virus
1b__YP_003075965__Carrot_yellow_leaf_virus__656190
Identity
- Accession:
- YP_003075965 ↗
- Protein ID:
- 1b
- Kingdom:
- euk
Quality
86.4
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Closteroviridae›
Closterovirus›
Carrot_yellow_leaf_virus
TaxID: 656190
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 335-429
Domain cluster:
rep: RNA-dependent_RNA_polymerase,_partial__YP_009241367__Grapevine_leafroll-associated_virus_13__1815581__D413-491
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00978.27 best | RdRP_2 | 76.4 | 2.90e-21 | 100.0% | 21.6% |
D2
medium
residues 24-78_127-143
Domain cluster:
rep: RdRp,_partial__YP_008858531__Carnation_yellow_fleck_virus__940280__D41-98
D3
medium
residues 79-126_144-170_215-270
Domain cluster:
rep: RdRp,_partial__YP_762622__Strawberry_chlorotic_fleck-associated_virus__399314__D41-159_203-257
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00978.27 best | RdRP_2 | 41.4 | 1.20e-10 | 44.3% | 12.7% |
D4
medium
residues 171-187_204-214_271-334
Domain cluster:
rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00978.27 best | RdRP_2 | 62.3 | 5.80e-17 | 70.7% | 14.5% |
D5
medium
residues 435-474