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2-polyprenylphenol_6-hydroxylase

Euk-Vir

Micromonas_pusilla_virus_12T

2-polyprenylphenol_6-hydroxylase__YP_007676115__Micromonas_pusilla_virus_12T__755272

Identity

Accession:
YP_007676115 ↗
Protein ID:
2-polyprenylphenol_6-hydroxylase
Kingdom:
euk

Quality

81.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Micromonas_pusilla_virus_12T

TaxID: 755272

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-86_138-182
PDB
Domain cluster: rep: Filtrate_w_scaffold_3_prodigal-single.1__X__X__00006__D52-125_184-200_213-229
D2 medium residues 89-137_183-235
PDB
Domain cluster: rep: IMGVR_UViG_3300016743_001362-3300016743-Ga0182083_16917122__D58-113_193-208
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03109.23 best ABC1 46.7 3.30e-12 52.0% 20.8%
PF03109.23 ABC1 51.8 8.80e-14 43.1% 15.5%
D3 medium residues 289-339
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fymF00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.87 59.0 3.77e-01 70.6% 92.8%
4jhrB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 65.0 3.95e-01 90.2% 22.5%
3ltoA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.77 70.0 5.02e-01 98.0% 66.4%
3gonA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.76 68.0 4.97e-01 100.0% 75.4%
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.74 69.0 5.34e-01 100.0% 59.0%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 63.0 4.76e-01 100.0% 46.7%
4ebjA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.70 62.0 4.55e-01 98.0% 65.4%
2wmoA01 1.25.40.410 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DOCK DHR2 domain, lobe A 0.69 61.0 4.37e-01 96.1% 62.7%
3zn3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 61.0 3.81e-01 98.0% 25.2%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.65 57.0 5.02e-01 98.0% 93.3%
5djsA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 56.0 4.02e-01 98.0% 36.4%
3vtxB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 55.0 3.72e-01 98.0% 29.0%
3sz7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 55.0 3.86e-01 98.0% 35.8%
1elwA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 53.0 4.04e-01 96.1% 44.4%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 54.0 4.47e-01 100.0% 87.1%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 54.0 4.30e-01 98.0% 52.5%
7wu8B01 1.20.1160.20 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › 0.62 50.0 4.37e-01 92.2% 72.2%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 53.0 4.04e-01 98.0% 45.0%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 53.0 3.47e-01 98.0% 43.2%
3fgyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 53.0 3.93e-01 100.0% 40.7%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.61 56.0 4.33e-01 98.0% 63.4%
4ui9Y03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 52.0 4.46e-01 96.1% 63.7%
2vgxB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 51.0 3.74e-01 98.0% 37.2%
1yvwA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.60 40.0 3.40e-01 70.6% 56.5%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 53.0 4.94e-01 100.0% 93.7%
4houB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 50.0 3.22e-01 98.0% 22.3%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 50.0 3.98e-01 100.0% 48.6%
5jgfA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 43.0 2.71e-01 92.2% 44.1%
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.51 42.0 3.16e-01 100.0% 85.9%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928083 206.1.1.14 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.89 80.0 4.86e-01 100.0% 17.9%
5008700 3930.1.1.0 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase 0.73 54.0 4.00e-01 78.4% 68.0%
3203178 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 58.0 4.82e-01 100.0% 68.4%
3612390 611.3.1.1 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 0.68 60.0 4.72e-01 94.1% 65.3%
4018262 109.4.1.1437 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3, TPR_8 0.67 60.0 4.09e-01 98.0% 32.1%
3599778 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 60.0 4.19e-01 100.0% 89.7%
3665994 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 58.0 4.08e-01 98.0% 38.7%
3334164 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 58.0 3.68e-01 98.0% 25.2%
3194337 109.4.1.1263 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_16 0.65 58.0 3.87e-01 98.0% 47.2%
3901620 109.7.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.64 55.0 4.99e-01 96.1% 74.3%
3681213 109.4.1.1864 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_BSK1_C 0.64 56.0 4.11e-01 98.0% 58.5%
3945098 109.4.1.924 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CcmH_CycH 0.64 54.0 4.26e-01 94.1% 49.5%
3250413 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 56.0 3.72e-01 98.0% 28.5%
3260749 109.4.1.2241 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_2, TPR_8, TPR_19 0.64 56.0 4.12e-01 98.0% 44.6%
5062658 109.4.1.2243 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29386 0.64 56.0 3.34e-01 98.0% 15.1%
3935017 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.63 57.0 4.89e-01 100.0% 90.0%
3702188 4168.1.1.0 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain 0.63 58.0 5.64e-01 100.0% 98.2%
3464862 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 53.0 3.47e-01 98.0% 28.3%
4959348 109.4.1.202 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.63 55.0 3.19e-01 96.1% 21.0%
3963715 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 51.0 4.13e-01 90.2% 60.0%
4606371 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.62 57.0 4.87e-01 96.1% 80.0%
4302503 109.4.1.45 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BTAD 0.62 55.0 3.84e-01 100.0% 96.2%
4959356 109.7.1.28 ↗ alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › TPR_11 0.61 51.0 4.25e-01 94.1% 63.6%
3467575 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.60 52.0 3.49e-01 96.1% 61.6%
3890914 109.4.1.2043 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_16 0.59 51.0 3.85e-01 98.0% 41.6%
3310608 109.7.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.59 51.0 4.32e-01 98.0% 63.5%