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22K

Euk-Vir

Murine_adenovirus_2

22K__YP_004123752__Murine_adenovirus_2__931972

Identity

Accession:
YP_004123752 ↗
Protein ID:
22K
Kingdom:
euk

Quality

60.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 143-189
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rrwB01 1.10.520.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › 0.79 69.0 4.62e-01 100.0% 57.1%
1w5sA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 4.99e-01 93.6% 62.1%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 69.0 5.50e-01 100.0% 54.3%
4iejA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 66.0 5.65e-01 95.7% 65.3%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.77 65.0 6.43e-01 97.9% 92.0%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.08e-01 100.0% 49.5%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.63e-01 100.0% 67.1%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 4.95e-01 97.9% 60.4%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.66e-01 91.5% 91.7%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.56e-01 100.0% 62.1%
2vliB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 52.0 3.57e-01 85.1% 76.3%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 56.0 5.28e-01 100.0% 90.0%
4guzA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.66 56.0 3.80e-01 100.0% 73.5%
1rylA00 3.40.1760.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family 0.65 53.0 3.78e-01 97.9% 64.3%
4c0kA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.65 48.0 3.83e-01 83.0% 52.5%
5um2A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.65 56.0 3.75e-01 93.6% 61.3%
1dxrL02 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.64 48.0 3.79e-01 85.1% 44.4%
3ufeA02 1.20.58.1950 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 42.0 4.15e-01 70.2% 64.2%
1au7A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 47.0 4.12e-01 80.9% 68.1%
4eekA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.63 54.0 4.92e-01 100.0% 77.3%
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.63 52.0 4.03e-01 97.9% 68.1%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 53.0 4.76e-01 100.0% 68.1%
3umcD02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 51.0 4.47e-01 100.0% 84.6%
1dj2A02 1.10.300.10 Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 0.62 48.0 3.97e-01 93.6% 94.9%
3dv9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 48.0 4.38e-01 95.7% 68.6%
2eggB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.60 51.0 3.62e-01 100.0% 84.0%
3f2bA05 6.10.50.10 Special › Helix non-globular › Insulin-like, subunit E › 0.58 38.0 3.82e-01 72.3% 66.7%
8gf5C01 3.30.70.470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 41.0 3.09e-01 83.0% 69.0%
4akgA06 1.10.8.710 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain 0.56 39.0 3.07e-01 70.2% 29.9%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 45.0 4.05e-01 95.7% 70.0%
5fmgG00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 43.0 2.84e-01 95.7% 19.6%
1adeA02 1.10.300.10 Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 0.55 44.0 3.54e-01 91.5% 83.0%
4bvxA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 42.0 3.33e-01 89.4% 62.9%
3d0kB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 41.0 2.60e-01 91.5% 44.0%
1ro7A00 3.90.1480.10 Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Alpha-2,3-sialyltransferase 0.52 44.0 2.81e-01 100.0% 55.6%
3fm9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 40.0 3.59e-01 95.7% 62.8%
1wixA01 1.10.418.10 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain 0.51 42.0 3.06e-01 100.0% 96.7%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.50 36.0 2.69e-01 76.6% 65.6%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3935045 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 77.0 6.77e-01 100.0% 85.7%
3932960 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 75.0 6.27e-01 100.0% 61.3%
3930423 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 77.0 7.09e-01 100.0% 90.0%
5006610 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 74.0 6.90e-01 100.0% 81.7%
3255630 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 74.0 6.84e-01 100.0% 81.7%
3901968 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 65.0 6.90e-01 87.2% 100.0%
3730184 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.82 72.0 6.88e-01 100.0% 94.5%
3693971 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.82 71.0 6.81e-01 100.0% 94.5%
3940696 101.1.1.103 alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 0.81 71.0 6.96e-01 97.9% 100.0%
4953748 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 68.0 5.90e-01 95.7% 62.7%
3910504 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 72.0 7.07e-01 100.0% 98.0%
3720424 101.1.2.480 alpha arrays › HTH › HTH › winged helix domain › Clr5 0.80 69.0 6.59e-01 97.9% 92.7%
4952724 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.80 68.0 5.00e-01 95.7% 37.6%
3811948 616.1.1.0 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.80 54.0 4.69e-01 70.2% 48.6%
3193745 101.1.2.480 alpha arrays › HTH › HTH › winged helix domain › Clr5 0.80 69.0 6.60e-01 100.0% 94.5%
3721082 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.80 69.0 6.65e-01 100.0% 94.5%
3732993 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.80 69.0 6.42e-01 100.0% 86.7%
3884711 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 69.0 6.23e-01 100.0% 80.0%
3925094 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 69.0 6.63e-01 100.0% 89.1%
4021549 109.4.1.547 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clr5 0.79 68.0 3.98e-01 100.0% 12.5%
4018903 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.79 68.0 6.54e-01 100.0% 94.5%
5070907 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 65.0 6.61e-01 95.7% 100.0%
4016548 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.79 66.0 6.31e-01 95.7% 87.3%
5050956 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.78 69.0 4.15e-01 100.0% 85.2%
4012770 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 67.0 6.44e-01 100.0% 94.5%
5049604 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 69.0 6.58e-01 100.0% 85.5%
5053360 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 68.0 5.63e-01 100.0% 57.6%
3689691 101.1.10.61 alpha arrays › HTH › HTH › Cyclin-like › Clr5 0.78 67.0 5.57e-01 100.0% 60.0%
4926838 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.78 67.0 6.06e-01 100.0% 76.9%
4952347 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 65.0 5.40e-01 95.7% 54.1%
3620979 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 67.0 6.44e-01 100.0% 96.4%
4019525 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.78 67.0 6.23e-01 100.0% 88.3%
5016992 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.46e-01 95.7% 97.8%
4953119 101.1.2.805 alpha arrays › HTH › HTH › winged helix domain › PF26350 0.77 66.0 4.40e-01 97.9% 27.2%
4978898 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.38e-01 93.6% 97.8%
4019326 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.76 66.0 6.30e-01 100.0% 89.1%
4975020 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.76 65.0 4.75e-01 100.0% 43.0%
3692546 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.76 65.0 6.47e-01 100.0% 98.0%
3958566 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.76 66.0 5.37e-01 100.0% 58.9%
3618386 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 59.0 6.08e-01 87.2% 100.0%
3687180 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 64.0 6.32e-01 100.0% 100.0%
3831185 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.75 50.0 4.44e-01 70.2% 48.6%
3740014 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 65.0 5.75e-01 100.0% 97.1%
3723191 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.75 64.0 6.14e-01 100.0% 94.5%
3589089 101.1.2.489 alpha arrays › HTH › HTH › winged helix domain › Transposase_mut 0.75 64.0 5.04e-01 100.0% 49.5%
4274627 101.1.1.266 alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.75 64.0 6.01e-01 100.0% 86.7%
5028095 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 63.0 4.99e-01 100.0% 47.6%
3732543 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.75 64.0 5.82e-01 100.0% 76.9%
4994794 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.55e-01 100.0% 70.7%
3426697 371.1.1.7 few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › zf-RVT 0.75 53.0 3.65e-01 76.6% 80.0%
5029224 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 63.0 5.90e-01 100.0% 81.7%
3961039 101.1.3.13 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut 0.74 60.0 6.15e-01 97.9% 97.8%
5079851 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 62.0 5.84e-01 97.9% 80.0%
3814458 101.1.2.472 alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 0.74 64.0 5.42e-01 100.0% 63.7%
5049118 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 62.0 5.70e-01 97.9% 78.5%
3487537 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 60.0 5.99e-01 95.7% 96.0%
4959187 101.1.2.489 alpha arrays › HTH › HTH › winged helix domain › Transposase_mut 0.74 63.0 6.27e-01 100.0% 96.0%
3366917 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.73 63.0 6.07e-01 100.0% 92.7%
3724068 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 61.0 5.88e-01 100.0% 96.4%
3709551 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 62.0 5.79e-01 100.0% 81.7%
4129575 101.1.1.187 alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 0.73 61.0 5.58e-01 100.0% 93.8%
3428283 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 61.0 5.74e-01 100.0% 88.3%
3958041 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 61.0 5.59e-01 100.0% 75.4%
3311830 708.1.1.7 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut 0.72 59.0 4.39e-01 97.9% 37.8%
3723123 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 60.0 5.69e-01 100.0% 83.3%
3962597 101.1.3.13 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut 0.72 60.0 5.54e-01 100.0% 75.4%
3929245 101.1.1.103 alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 0.72 60.0 5.81e-01 100.0% 90.9%
3957316 101.1.1.266 alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.72 60.0 5.50e-01 100.0% 75.4%
3814136 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.86e-01 100.0% 90.9%
4929815 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 5.42e-01 97.9% 73.8%
3334149 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 5.79e-01 100.0% 90.9%
4958195 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 5.73e-01 100.0% 89.1%
3617137 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 58.0 5.57e-01 97.9% 92.7%
5021354 101.1.2.619 alpha arrays › HTH › HTH › winged helix domain › HTH_33 0.70 59.0 5.40e-01 97.9% 80.0%
5003693 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 58.0 5.34e-01 100.0% 80.0%
5008720 101.1.1.548 alpha arrays › HTH › HTH › Three-helical HTH › HTH_32 0.70 57.0 5.31e-01 100.0% 80.0%
4952808 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 57.0 5.55e-01 100.0% 94.5%
5007660 101.1.1.187 alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 0.70 59.0 5.40e-01 100.0% 81.5%
3327321 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.68 52.0 4.26e-01 85.1% 76.7%
3589159 101.1.2.488 alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66 0.68 56.0 4.97e-01 97.9% 66.7%
3316706 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 50.0 3.98e-01 83.0% 68.0%
3575777 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.66 51.0 5.14e-01 95.7% 100.0%
3518121 101.1.4.1 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou 0.65 47.0 3.62e-01 78.7% 35.7%
3182801 592.2.1.2 alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG 0.64 54.0 4.01e-01 100.0% 66.2%
3224400 103.5.1.0 alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like 0.62 42.0 4.13e-01 72.3% 64.0%
5039745 2003.1.1.36 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N 0.56 45.0 2.96e-01 97.9% 19.1%
3437796 101.1.11.136 alpha arrays › HTH › HTH › Ribbon-helix-helix › PF30992 0.52 40.0 4.02e-01 91.5% 98.0%