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2A

Euk-Vir

Canine_picornavirus

2A__YP_005352649__Canine_picornavirus__1196647

Identity

Accession:
YP_005352649 ↗
Protein ID:
2A
Kingdom:
euk

Quality

73.9 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Mischivirus› Canine_picornavirus

TaxID: 1196647

Cluster

View cluster (187 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-34_109-246
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.86 52.0 6.65e-01 79.9% 98.9%
4fvdA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 52.0 6.63e-01 79.2% 100.0%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 47.0 5.89e-01 72.1% 96.0%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.75 58.0 5.47e-01 79.2% 98.9%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 48.0 5.55e-01 89.0% 93.0%
1mbmA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 35.0 4.70e-01 85.1% 97.4%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 43.0 5.20e-01 72.1% 96.2%
5fahA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 48.0 5.46e-01 75.3% 96.6%
2qf4A01 2.40.10.340 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 0.66 30.0 4.10e-01 89.6% 82.3%
2j5uA02 2.40.10.340 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 0.66 33.0 4.44e-01 90.3% 89.3%
2rdlA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 47.0 5.34e-01 74.0% 96.6%
5fcrA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 46.0 5.14e-01 74.0% 96.7%
3h7oB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 45.0 5.18e-01 72.7% 99.1%
3h7tB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 45.0 5.02e-01 72.7% 96.7%
1gvzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 44.0 4.97e-01 74.0% 96.7%
2v3mA00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.61 32.0 3.98e-01 94.8% 81.9%
4lusB01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.58 34.0 3.53e-01 97.4% 59.7%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4882551 1.1.5.5 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.84 52.0 5.36e-01 79.9% 64.4%
261 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.77 59.0 5.19e-01 78.6% 100.0%
2779726 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.75 59.0 5.43e-01 80.5% 97.3%
4028981 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.70 55.0 4.81e-01 80.5% 95.5%
3435448 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.70 55.0 4.70e-01 81.2% 98.7%
5048051 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.70 38.0 4.85e-01 96.8% 91.0%
3448106 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.69 53.0 4.48e-01 80.5% 91.6%
3066474 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.69 57.0 5.10e-01 86.4% 99.5%
4934715 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.68 54.0 4.65e-01 82.5% 95.7%
3443528 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.68 54.0 4.75e-01 82.5% 98.1%
3428386 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.68 54.0 4.51e-01 82.5% 82.8%
3969197 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.67 54.0 4.39e-01 82.5% 94.7%
5037776 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.67 54.0 4.68e-01 82.5% 99.1%
3908241 1.1.7.66 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Trypsin 0.67 41.0 4.86e-01 78.6% 88.6%
3506871 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.66 52.0 3.66e-01 83.1% 58.5%
3417330 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.65 52.0 4.58e-01 82.5% 96.7%
3403377 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.65 52.0 4.39e-01 83.8% 93.2%
3405914 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.64 51.0 4.17e-01 83.1% 85.8%
3409619 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.64 51.0 4.21e-01 83.1% 91.5%
3505064 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.63 50.0 4.12e-01 83.1% 90.9%
3407383 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.61 48.0 4.04e-01 82.5% 95.0%
3248403 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.61 44.0 4.66e-01 76.0% 83.7%
3403363 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.58 49.0 4.08e-01 89.0% 93.6%
1147338 1.1.5.5 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.58 50.0 5.27e-01 92.9% 100.0%
3714390 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.57 33.0 3.62e-01 94.8% 68.0%
D2 medium residues 35-108
PDB
Domain cluster: rep: 2A__YP_004782535__Bat_picornavirus_3__1074865__D35-107