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2A
Euk-VirSichuan_takin_enterovirus
2A__YP_009483881__Sichuan_takin_enterovirus__2220002
Identity
- Accession:
- YP_009483881 ↗
- Protein ID:
- 2A
- Kingdom:
- euk
Quality
87.7
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Picornavirales›
Picornaviridae›
Enterovirus›
Sichuan_takin_enterovirus
TaxID: 2220002
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-182
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22663.3 best | Rhv_5 | 110.5 | 1.50e-31 | 92.0% | 72.5% |
| PF00073.27 | Rhv | 102.7 | 2.60e-29 | 66.7% | 59.1% |
D2
high
residues 207-334
Domain cluster:
rep: uncovered_polypeptide_polyprotein__YP_529550_615-1154__Newbury_agent_1__331642__D396-536
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00947.26 best | Pico_P2A | 196.7 | 1.80e-58 | 92.2% | 92.9% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ijd101 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.81 | 77.0 | 6.75e-01 | 100.0% | 81.7% |
| 4b6eB01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.74 | 69.0 | 5.78e-01 | 100.0% | 62.9% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 53.0 | 5.95e-01 | 98.4% | 100.0% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 36.0 | 3.90e-01 | 78.1% | 84.7% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4882551 | 1.1.5.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A | 1.00 | 98.0 | 9.15e-01 | 100.0% | 85.9% |
| 1147338 | 1.1.5.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A | 0.89 | 83.0 | 8.02e-01 | 100.0% | 88.7% |
| 261 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.82 | 76.0 | 6.35e-01 | 100.0% | 81.6% |
| 2779726 | 1.1.17.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 | 0.81 | 77.0 | 6.64e-01 | 100.0% | 79.0% |
| 5037776 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.81 | 75.0 | 6.17e-01 | 100.0% | 82.7% |
| 4934715 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.81 | 75.0 | 6.04e-01 | 100.0% | 78.6% |
| 376155 | 1.1.17.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 | 0.79 | 74.0 | 6.34e-01 | 100.0% | 79.1% |
| 22055 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.79 | 74.0 | 6.37e-01 | 100.0% | 84.8% |
| 4647114 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 73.0 | 5.83e-01 | 100.0% | 66.7% |
| 3816593 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 72.0 | 5.97e-01 | 100.0% | 72.7% |
| 4625374 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 72.0 | 5.87e-01 | 100.0% | 69.6% |
| 4028467 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.76 | 70.0 | 5.39e-01 | 100.0% | 55.3% |
| 3468829 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.76 | 70.0 | 5.56e-01 | 100.0% | 68.1% |
| 3659932 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.75 | 70.0 | 5.53e-01 | 100.0% | 67.6% |
| 3194806 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.75 | 69.0 | 5.23e-01 | 100.0% | 85.2% |
| 3203392 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.74 | 68.0 | 5.43e-01 | 100.0% | 73.5% |
| 1161323 | 1.1.5.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S29 | 0.74 | 69.0 | 6.02e-01 | 100.0% | 70.2% |
| 3464880 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.73 | 68.0 | 5.64e-01 | 100.0% | 74.0% |
| 3505835 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 67.0 | 5.30e-01 | 100.0% | 78.8% |
| 5023947 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.72 | 68.0 | 6.10e-01 | 100.0% | 77.6% |
| 3816110 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.72 | 67.0 | 5.48e-01 | 100.0% | 64.0% |
| 3500586 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.72 | 67.0 | 5.22e-01 | 100.0% | 77.3% |
| 4974463 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.72 | 67.0 | 6.13e-01 | 100.0% | 83.4% |
| 3507692 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.69 | 53.0 | 4.99e-01 | 78.9% | 86.0% |
| 3503044 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.67 | 57.0 | 4.98e-01 | 90.6% | 93.5% |
| 3512272 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 31.0 | 3.94e-01 | 85.2% | 94.7% |
| 3253267 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 31.0 | 3.63e-01 | 100.0% | 80.0% |