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2A_mature_peptide

Euk-Vir

Hepatovirus_A

2A_mature_peptide__NP_740553__Hepatovirus_A__12092

Identity

Accession:
NP_740553 ↗
Protein ID:
2A_mature_peptide
Kingdom:
euk

Quality

68.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 49-178
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20758.3 best 2B_soluble 306.7 2.60e-92 100.0% 91.5%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 27.0 3.57e-01 88.5% 75.7%
5azpA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.54 22.0 2.69e-01 96.2% 54.3%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.53 33.0 3.65e-01 93.8% 81.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1495188 219.2.1.1 a+b complex topology › Cysteine proteinases-like › 2B protein soluble domain › 2B protein soluble domain › 2B_soluble 0.86 83.0 8.04e-01 100.0% 93.0%
3249483 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 28.0 3.22e-01 100.0% 70.0%
3694832 219.1.1.93 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.53 43.0 4.44e-01 87.7% 100.0%
3815495 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.51 27.0 3.45e-01 86.9% 91.4%