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38.7K_protein
Euk-VirOperophtera_brumata_nucleopolyhedrovirus
38.7K_protein__YP_009552674__Operophtera_brumata_nucleopolyhedrovirus__1046267
Identity
- Accession:
- YP_009552674 ↗
- Protein ID:
- 38.7K_protein
- Kingdom:
- euk
Quality
71.4
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Operophtera_brumata_nucleopolyhedrovirus
TaxID: 1046267
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-145
Domain cluster:
rep: Bro25__YP_009702174__Heliothis_virescens_ascovirus_3g__1246651__D4-128
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 52.5 | 8.50e-14 | 74.1% | 99.0% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 21.0 | 2.83e-01 | 87.0% | 54.4% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 23.0 | 3.05e-01 | 86.3% | 79.4% |
| 8ckpA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 39.0 | 3.10e-01 | 96.9% | 38.3% |
| 3cjmA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 41.0 | 3.33e-01 | 87.0% | 93.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968916 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.79 | 61.0 | 6.73e-01 | 90.8% | 98.1% |
| 1790169 | 101.1.9.7 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Baculo_PEP_N | 0.79 | 60.0 | 6.63e-01 | 87.8% | 96.2% |
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.75 | 58.0 | 6.38e-01 | 88.5% | 96.4% |
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.75 | 51.0 | 5.88e-01 | 75.6% | 91.0% |
| 4954530 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.68 | 52.0 | 5.56e-01 | 80.9% | 100.0% |
| 3941747 | 101.1.9.78 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › AntA | 0.63 | 51.0 | 5.49e-01 | 84.0% | 100.0% |
| 4462449 | 7580.1.1.1 ↗ | a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 | 0.56 | 41.0 | 4.07e-01 | 93.9% | 72.6% |
| 3388088 | 7580.1.1.1 ↗ | a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 | 0.55 | 39.0 | 3.95e-01 | 93.9% | 71.6% |
| 4420266 | 7580.1.1.1 ↗ | a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 | 0.55 | 40.0 | 3.99e-01 | 93.1% | 71.9% |
| 3978651 | 241.13.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif | 0.52 | 29.0 | 3.23e-01 | 78.6% | 66.7% |
| 3193883 | 4161.1.1.2 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N | 0.51 | 36.0 | 3.18e-01 | 71.8% | 75.3% |
| 2722305 | 7579.1.1.95 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Hydrolase_4 | 0.51 | 37.0 | 2.90e-01 | 91.6% | 34.0% |
| 4191690 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.50 | 21.0 | 2.83e-01 | 87.8% | 75.9% |
| 5035217 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.50 | 40.0 | 3.03e-01 | 95.4% | 34.4% |
| 3786637 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.50 | 34.0 | 2.96e-01 | 70.2% | 78.5% |
D2
high
residues 259-359