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3A
Euk-VirCanine_picornavirus
3A__YP_005352652__Canine_picornavirus__1196647
Identity
- Accession:
- YP_005352652 ↗
- Protein ID:
- 3A
- Kingdom:
- euk
Quality
72.1
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Picornavirales›
Picornaviridae›
Mischivirus›
Canine_picornavirus
TaxID: 1196647
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 10-107
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08727.17 best | P3A | 49.2 | 3.70e-13 | 60.2% | 66.1% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1miuA04 | 6.10.70.10 | Special › Helix non-globular › Topoisomerase I; Chain A, domain 4 › | 0.61 | 42.0 | 3.92e-01 | 70.4% | 61.5% |
| 6omzA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.50 | 34.0 | 2.53e-01 | 70.4% | 81.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4337092 | 3291.1.1.5 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Relaxase_C | 0.71 | 43.0 | 3.84e-01 | 79.6% | 43.5% |
| 3614643 | 109.4.1.1334 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, PPR_long | 0.67 | 47.0 | 2.76e-01 | 72.4% | 34.3% |
| 4498509 | 3755.4.1.86 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › DUF445 | 0.60 | 37.0 | 3.39e-01 | 74.5% | 48.8% |
| 3379603 | 109.4.1.1383 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif | 0.57 | 41.0 | 2.45e-01 | 74.5% | 42.9% |
| 4978600 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.54 | 46.0 | 3.84e-01 | 92.9% | 80.0% |
| 3659483 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.51 | 36.0 | 2.62e-01 | 74.5% | 55.2% |