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3A

Euk-Vir

megrivirus_C2

3A__YP_009055043__megrivirus_C2__2847848

Identity

Accession:
YP_009055043 ↗
Protein ID:
3A
Kingdom:
euk

Quality

64.1 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Megrivirus› megrivirus_C2

TaxID: 2847848

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-76
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ra8A01 2.20.140.10 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain 0.74 49.0 4.73e-01 76.1% 60.8%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.73 47.0 4.43e-01 73.1% 55.0%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 61.0 4.93e-01 94.0% 75.6%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 49.0 4.51e-01 88.1% 57.0%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 61.0 5.15e-01 97.0% 94.5%
4dxkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.69 50.0 4.09e-01 77.6% 100.0%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.68 47.0 4.03e-01 77.6% 44.1%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 57.0 4.64e-01 92.5% 83.1%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.67 45.0 3.79e-01 77.6% 40.3%
1a31A03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.65 55.0 4.29e-01 95.5% 71.3%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.65 47.0 4.09e-01 77.6% 55.7%
6lkzC01 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.64 47.0 2.95e-01 77.6% 52.6%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.64 46.0 3.66e-01 79.1% 37.2%
3q48A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 45.0 4.20e-01 73.1% 84.3%
1xjvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 46.0 3.60e-01 82.1% 35.2%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 44.0 3.34e-01 74.6% 100.0%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 43.0 4.43e-01 82.1% 75.0%
3m4aA03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.63 54.0 4.55e-01 100.0% 76.3%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.63 46.0 4.01e-01 80.6% 60.2%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 45.0 2.91e-01 76.1% 19.3%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.62 45.0 3.28e-01 77.6% 71.7%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.62 55.0 3.31e-01 100.0% 49.8%
2gdqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 45.0 3.88e-01 77.6% 55.1%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 46.0 3.74e-01 80.6% 42.7%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.61 46.0 4.60e-01 86.6% 79.1%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.61 43.0 2.83e-01 80.6% 16.8%
1n02A00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.61 45.0 3.99e-01 80.6% 85.3%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 43.0 3.90e-01 74.6% 60.4%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.60 46.0 4.91e-01 88.1% 96.6%
3f4lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 45.0 3.10e-01 80.6% 78.0%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 45.0 4.43e-01 92.5% 78.9%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.59 42.0 3.26e-01 76.1% 63.8%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 52.0 3.65e-01 100.0% 81.2%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 43.0 3.79e-01 79.1% 75.0%
4f98A00 2.30.140.50 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Protein of unknown function DUF2790 0.59 40.0 4.12e-01 74.6% 75.8%
2l2fA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.59 43.0 3.73e-01 79.1% 88.0%
3dorA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.59 43.0 3.66e-01 77.6% 98.1%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.59 40.0 3.50e-01 71.6% 48.5%
3cetB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 42.0 3.55e-01 74.6% 71.8%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.58 48.0 3.74e-01 100.0% 47.4%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.58 49.0 3.92e-01 95.5% 57.7%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 45.0 3.13e-01 85.1% 32.9%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 39.0 3.74e-01 70.1% 62.5%
4fczA00 3.10.450.710 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC 0.58 45.0 3.35e-01 85.1% 54.1%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 40.0 2.71e-01 77.6% 17.9%
5mteA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.58 47.0 3.84e-01 94.0% 68.6%
1sr9A02 3.30.160.270 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain 0.58 45.0 3.44e-01 86.6% 57.9%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 4.00e-01 76.1% 78.7%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 44.0 3.38e-01 85.1% 41.4%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 49.0 3.67e-01 100.0% 69.4%
4gl6A01 3.10.450.570 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Domain of unknown function (DUF5037), N-terminal subdomain 0.57 41.0 3.93e-01 79.1% 73.2%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 3.46e-01 100.0% 49.6%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.57 39.0 3.34e-01 73.1% 46.9%
2uurA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 41.0 2.92e-01 77.6% 62.9%
1dt9A01 3.30.960.10 Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 0.56 40.0 3.52e-01 76.1% 100.0%
2kw4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 39.0 3.14e-01 74.6% 73.5%
3g5kA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.56 45.0 3.41e-01 92.5% 61.2%
3deeA02 3.90.930.50 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.56 40.0 3.40e-01 76.1% 45.6%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 45.0 3.75e-01 91.0% 88.1%
3iuzA00 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.56 42.0 2.76e-01 82.1% 18.8%
1tyjA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 39.0 3.03e-01 76.1% 95.9%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.56 40.0 3.71e-01 77.6% 66.3%
1bqnA05 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 39.0 3.21e-01 76.1% 73.3%
1o97C00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 47.0 3.21e-01 98.5% 31.1%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.54 42.0 3.01e-01 83.6% 49.0%
3e3uA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.54 44.0 3.26e-01 94.0% 54.1%
2bcqA03 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 38.0 3.14e-01 74.6% 73.2%
1i1nA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 42.0 3.08e-01 94.0% 77.2%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 40.0 4.10e-01 88.1% 84.8%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 4.02e-01 85.1% 86.2%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 38.0 3.10e-01 79.1% 39.4%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 40.0 2.50e-01 82.1% 83.5%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.67e-01 82.1% 65.9%
6ya6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 36.0 3.26e-01 74.6% 50.0%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.35e-01 77.6% 99.0%
4o8uA00 3.30.420.440 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF4152 0.51 41.0 2.89e-01 89.6% 89.0%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4623301 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.78 63.0 5.54e-01 86.6% 91.6%
3789900 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.77 63.0 4.88e-01 86.6% 54.1%
3592269 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.76 65.0 5.12e-01 92.5% 95.6%
3253057 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 66.0 4.92e-01 94.0% 75.5%
3216916 220.1.1.23 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ICAP-1_inte_bdg 0.75 68.0 5.17e-01 100.0% 88.7%
3719687 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 60.0 5.82e-01 88.1% 85.3%
4018977 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 62.0 5.01e-01 92.5% 76.0%
3859768 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.73 60.0 4.41e-01 89.6% 70.3%
3919870 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.72 62.0 5.05e-01 94.0% 69.2%
3212968 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.72 61.0 4.86e-01 94.0% 85.2%
3772701 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.71 61.0 4.83e-01 94.0% 61.5%
3497290 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 60.0 5.06e-01 94.0% 73.7%
3411578 220.1.1.115 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_19 0.71 60.0 4.62e-01 92.5% 73.8%
4028996 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 56.0 4.36e-01 86.6% 51.0%
3701911 5.1.2.33 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.70 51.0 3.50e-01 86.6% 23.2%
4930437 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.70 57.0 4.95e-01 89.6% 72.4%
3289877 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.70 45.0 5.13e-01 71.6% 88.0%
5049738 2.1.1.94 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TLP1_add_C 0.70 52.0 4.92e-01 80.6% 66.3%
3811281 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 51.0 4.68e-01 80.6% 61.2%
5025053 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 58.0 4.63e-01 94.0% 74.8%
3226466 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.69 49.0 3.91e-01 74.6% 56.2%
3330560 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 49.0 3.67e-01 82.1% 31.2%
4320111 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.68 45.0 4.00e-01 77.6% 46.0%
3589473 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.68 60.0 5.70e-01 100.0% 91.3%
3582308 220.1.1.16 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF1681 0.68 55.0 4.89e-01 89.6% 82.1%
3756543 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 48.0 3.59e-01 74.6% 46.7%
3410214 394.1.1.0 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.67 44.0 4.66e-01 73.1% 76.7%
3407218 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.67 43.0 4.72e-01 71.6% 80.0%
3383138 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 49.0 4.68e-01 82.1% 67.9%
4938125 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.66 53.0 4.89e-01 88.1% 85.9%
4302400 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.66 45.0 2.68e-01 79.1% 8.9%
3234621 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.66 58.0 4.59e-01 98.5% 81.5%
4089654 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.65 43.0 3.72e-01 77.6% 42.9%
3741704 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.65 48.0 3.91e-01 80.6% 90.8%
4463884 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 46.0 3.86e-01 74.6% 58.3%
3664617 2.1.1.223 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 0.64 47.0 4.35e-01 82.1% 60.0%
3255946 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 51.0 4.82e-01 86.6% 90.0%
3896280 284.1.3.4 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.64 44.0 4.25e-01 71.6% 94.7%
3907223 5.1.3.179 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Sortilin-Vps10 0.63 46.0 3.12e-01 80.6% 20.8%
3678038 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.63 47.0 4.57e-01 80.6% 76.0%
4940942 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 51.0 4.71e-01 94.0% 92.5%
5041244 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 42.0 4.22e-01 70.1% 100.0%
3238035 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.62 42.0 4.80e-01 76.1% 94.0%
3667340 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.62 47.0 3.83e-01 82.1% 43.2%
3744517 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.62 45.0 3.76e-01 77.6% 71.7%
4928276 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.62 42.0 2.95e-01 71.6% 23.6%
3822274 2485.1.1.78 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Suc_Fer-like 0.61 42.0 3.47e-01 73.1% 65.4%
4297175 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.61 44.0 4.01e-01 76.1% 90.0%
4087213 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.61 44.0 4.24e-01 76.1% 68.0%
4566718 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.61 44.0 4.02e-01 77.6% 92.2%
3504767 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.61 44.0 4.41e-01 80.6% 74.3%
4089593 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.60 46.0 3.76e-01 83.6% 70.0%
3834272 5.1.5.96 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.60 44.0 2.90e-01 77.6% 26.4%
3542914 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.60 44.0 3.68e-01 79.1% 65.0%
4966092 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.59 42.0 3.51e-01 83.6% 41.1%
5035423 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.59 41.0 3.81e-01 71.6% 60.0%
3514912 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.59 42.0 4.15e-01 77.6% 93.3%
3340171 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 42.0 4.07e-01 77.6% 85.0%
3360687 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.59 44.0 3.32e-01 79.1% 59.4%
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.58 45.0 4.48e-01 83.6% 78.6%
3368292 2485.1.1.78 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Suc_Fer-like 0.58 45.0 3.66e-01 83.6% 74.4%
4594302 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.58 45.0 3.78e-01 85.1% 50.4%
5053329 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 40.0 3.38e-01 73.1% 40.8%
3931696 241.4.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.57 39.0 3.42e-01 71.6% 49.5%
3521864 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 41.0 2.91e-01 77.6% 60.9%
4039287 289.1.1.1 ↗ a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.56 45.0 3.47e-01 92.5% 55.9%
5052057 246.2.1.9 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.56 40.0 3.11e-01 77.6% 90.6%
4394739 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.56 40.0 4.02e-01 77.6% 72.9%
3633568 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 38.0 2.50e-01 71.6% 25.8%
4941086 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.56 47.0 4.05e-01 95.5% 66.7%
4256308 289.1.1.1 ↗ a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.55 45.0 3.52e-01 94.0% 60.0%
4971260 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 43.0 3.53e-01 89.6% 75.4%
4980674 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 37.0 3.16e-01 71.6% 98.2%
3906579 213.1.1.6 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ 0.54 38.0 3.21e-01 76.1% 55.2%
3495496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 42.0 4.01e-01 88.1% 86.3%
3894181 101.1.2.115 ↗ alpha arrays › HTH › HTH › winged helix domain › CDC27 0.53 35.0 2.62e-01 95.5% 25.7%
5077459 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 42.0 3.35e-01 89.6% 70.3%
1877618 330.15.1.1 ↗ a+b two layers › dsRBD-like › VtrA protein periplasmic domain › VtrA protein periplasmic domain › VtrA_C 0.53 37.0 3.45e-01 76.1% 55.6%
5021851 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.53 44.0 2.83e-01 95.5% 28.1%
3214491 11.1.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.52 37.0 2.88e-01 77.6% 65.6%
3957296 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.51 44.0 3.39e-01 95.5% 92.7%
2859147 7091.1.1.1 ↗ a+b complex topology › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › PF29401 0.51 42.0 3.41e-01 98.5% 64.0%
4280539 109.21.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 0.51 44.0 2.52e-01 100.0% 36.2%
D2 medium residues 95-150
PDB