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3C-like_proteinase
Euk-VirRat_coronavirus_Parker
3C-like_proteinase__YP_009924372__Rat_coronavirus_Parker__502102
Identity
- Accession:
- YP_009924372 ↗
- Protein ID:
- 3C-like_proteinase
- Kingdom:
- euk
Quality
89.9
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Rat_coronavirus_Parker
TaxID: 502102
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 201-298
Domain cluster:
rep: 3C-like_cysteine_proteinase__YP_009944285__Betacoronavirus_England_1__1263720__D204-301
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05409.21 best | Peptidase_C30 | 121.6 | 5.60e-35 | 100.0% | 34.2% |
D2
medium
residues 1-14_99-197
Domain cluster:
rep: 3C-like_protease__NP_828863__SARS_coronavirus_Tor2__227984__D1-14_99-198
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05409.21 best | Peptidase_C30 | 162.1 | 2.60e-47 | 98.2% | 35.9% |
D3
medium
residues 15-98
Domain cluster:
rep: NSP5__YP_001941178__Turkey_coronavirus__11152__D14-97
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05409.21 best | Peptidase_C30 | 77.7 | 1.40e-21 | 83.3% | 24.3% |