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3C

Euk-Vir

bovine_rhinitis_B_virus_1

3C__YP_001686947__bovine_rhinitis_B_virus_1__2758977

Identity

Accession:
YP_001686947 ↗
Protein ID:
3C
Kingdom:
euk

Quality

93.0 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Aphthovirus› bovine_rhinitis_B_virus_1

TaxID: 2758977

Cluster

View cluster (187 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-96
PDB
Domain cluster: rep: 3C__YP_009111405__torchivirus_A1__1578826__D3-94
D2 high residues 110-190
PDB
Domain cluster: rep: putative_3C_peptidase__YP_009553718__tremovirus_B1__2058161__D98-201
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00548.27 best Peptidase_C3 33.7 4.90e-08 92.6% 38.0%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.89 78.0 5.87e-01 100.0% 42.2%
1havB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.87 82.0 7.45e-01 100.0% 86.4%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.87 79.0 7.15e-01 100.0% 74.5%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 74.0 6.82e-01 100.0% 77.8%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 71.0 6.74e-01 100.0% 81.1%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 73.0 6.70e-01 100.0% 88.3%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.78 73.0 5.29e-01 100.0% 40.4%
4fvdA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 68.0 6.50e-01 100.0% 83.0%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 66.0 6.02e-01 100.0% 73.1%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 69.0 6.29e-01 100.0% 77.9%
1si5H01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 65.0 5.66e-01 100.0% 77.3%
1lvoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 54.0 5.27e-01 100.0% 76.1%
1autC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 61.0 5.23e-01 100.0% 76.9%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 63.0 5.72e-01 100.0% 76.2%
3f1sB03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 61.0 5.41e-01 100.0% 73.9%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 61.0 4.88e-01 100.0% 56.5%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 58.0 4.77e-01 100.0% 74.2%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 57.0 4.84e-01 100.0% 81.0%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 45.0 4.58e-01 81.5% 75.9%
3u5wA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 56.0 4.90e-01 100.0% 79.4%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 43.0 3.40e-01 74.1% 41.6%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 47.0 4.39e-01 98.8% 68.0%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.60 45.0 4.51e-01 81.5% 80.7%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.60 35.0 3.81e-01 100.0% 70.1%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 52.0 4.67e-01 100.0% 91.4%
2wzpP01 2.40.30.210 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 52.0 4.73e-01 100.0% 95.4%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 4.37e-01 100.0% 85.3%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 3.82e-01 77.8% 77.6%
5z0uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.64e-01 87.7% 62.1%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 39.0 3.04e-01 82.7% 59.8%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.51 42.0 3.20e-01 91.4% 91.5%
2m83A00 2.60.40.2440 Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain 0.51 40.0 3.41e-01 87.7% 54.0%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
376155 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.99 92.0 6.60e-01 100.0% 39.8%
3066474 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.96 89.0 6.32e-01 100.0% 37.5%
5072499 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.87 78.0 5.69e-01 100.0% 39.0%
3694033 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.81 72.0 5.86e-01 100.0% 54.3%
4939745 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 73.0 5.23e-01 100.0% 36.8%
3468829 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.79 73.0 5.04e-01 100.0% 33.9%
4028467 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 72.0 4.86e-01 100.0% 29.1%
3960372 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.78 62.0 6.15e-01 100.0% 80.0%
2141908 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 70.0 5.18e-01 100.0% 40.0%
3659932 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.77 70.0 4.90e-01 100.0% 34.4%
5019852 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.76 70.0 5.10e-01 100.0% 39.0%
1147338 1.1.5.5 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.75 67.0 5.47e-01 100.0% 54.9%
3510405 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 65.0 4.86e-01 100.0% 54.1%
5051302 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 64.0 4.59e-01 100.0% 34.2%
3501491 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.73 67.0 5.57e-01 100.0% 69.6%
3244773 1.1.5.49 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.73 63.0 4.35e-01 100.0% 29.2%
3505835 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 67.0 4.63e-01 100.0% 37.3%
3507692 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.73 66.0 5.34e-01 100.0% 62.7%
3509647 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.72 66.0 4.37e-01 100.0% 30.2%
3504279 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.72 65.0 4.54e-01 100.0% 39.2%
3515391 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 65.0 4.52e-01 100.0% 40.0%
4911687 1.1.5.19 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.71 54.0 4.33e-01 100.0% 42.0%
3500586 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.71 64.0 4.45e-01 100.0% 35.8%
1099000 1.1.5.19 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.70 54.0 4.10e-01 100.0% 35.7%
3576746 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.70 63.0 4.81e-01 100.0% 55.1%
3454710 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.70 63.0 4.57e-01 100.0% 42.3%
3502140 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 64.0 4.41e-01 100.0% 39.6%
4864011 1.1.7.41 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.69 48.0 4.42e-01 75.3% 56.2%
4852372 1.1.5.19 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.68 52.0 3.95e-01 100.0% 34.6%
3744808 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.68 60.0 4.65e-01 100.0% 77.3%
3229859 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.68 58.0 4.03e-01 100.0% 29.4%
3509725 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.65 57.0 4.12e-01 100.0% 35.0%
3988859 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.62 45.0 4.13e-01 76.5% 64.8%
3970225 1.1.13.68 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27125 0.61 50.0 4.91e-01 100.0% 83.3%
3774692 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.56 39.0 4.00e-01 75.3% 75.0%
3964118 11.14.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 0.55 43.0 4.11e-01 100.0% 74.5%
3542453 11.1.1.54 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 0.55 43.0 3.80e-01 87.7% 57.6%
3910660 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.54 43.0 3.61e-01 87.7% 51.4%
3787702 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.54 38.0 3.20e-01 76.5% 95.5%
3730696 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.52 37.0 3.28e-01 76.5% 65.6%
3650296 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.52 37.0 3.49e-01 100.0% 63.2%
3900933 11.1.1.54 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 0.52 41.0 3.47e-01 87.7% 55.0%
3716385 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.45e-01 88.9% 55.0%
None — 0.51 40.0 3.35e-01 86.4% 56.6%
4216863 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 4.37e-01 96.3% 92.9%