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3C

Euk-Vir

megrivirus_C2

3C__YP_009055045__megrivirus_C2__2847848

Identity

Accession:
YP_009055045 ↗
Protein ID:
3C
Kingdom:
euk

Quality

89.7 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Megrivirus› megrivirus_C2

TaxID: 2847848

Cluster

View cluster (187 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-92
PDB
Domain cluster: rep: hypothetical_protein__YP_009825042__Birds-foot_trefoil_enamovirus_1__2283314__D329-413
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bhgA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.88 78.0 7.84e-01 93.5% 100.0%
3qzqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 60.0 6.89e-01 81.5% 100.0%
6ku8A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 59.0 6.72e-01 81.5% 100.0%
1qa7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 73.0 6.87e-01 96.7% 89.1%
2o8lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 66.0 6.42e-01 91.3% 99.0%
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 69.0 7.05e-01 97.8% 100.0%
3h7oA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 61.0 5.69e-01 84.8% 86.6%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 67.0 6.71e-01 98.9% 95.7%
2ok5A02 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.74 58.0 4.35e-01 83.7% 46.1%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 68.0 6.45e-01 100.0% 94.3%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.73 66.0 5.04e-01 100.0% 44.3%
1dleA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 63.0 5.58e-01 92.4% 86.8%
3cp7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 62.0 5.77e-01 90.2% 98.2%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 63.0 6.53e-01 93.5% 100.0%
4kkdB04 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 59.0 5.30e-01 85.9% 88.7%
3tk9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 59.0 5.61e-01 85.9% 87.9%
2hlcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 57.0 5.50e-01 83.7% 88.5%
2r0lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 57.0 5.30e-01 84.8% 88.5%
3h7tA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 57.0 5.35e-01 85.9% 82.9%
1shyA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 57.0 5.50e-01 85.9% 89.2%
1p3cA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 58.0 5.50e-01 89.1% 88.2%
1orfA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 56.0 5.36e-01 84.8% 87.6%
1m9uA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 56.0 5.33e-01 85.9% 90.8%
5hmaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 61.0 6.29e-01 93.5% 100.0%
6mv4H02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 56.0 5.35e-01 85.9% 88.0%
2aiqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 59.0 5.51e-01 90.2% 84.1%
5f8zA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 56.0 5.24e-01 85.9% 88.4%
3tvjB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 56.0 5.31e-01 85.9% 87.9%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 58.0 5.78e-01 90.2% 100.0%
5lhrA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 54.0 5.01e-01 84.8% 90.6%
1ltoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 54.0 5.14e-01 85.9% 100.0%
1eq9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 54.0 5.18e-01 85.9% 88.6%
1faxA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 54.0 5.14e-01 85.9% 87.9%
5dj7A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 54.0 5.12e-01 85.9% 83.3%
2f91A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 53.0 5.00e-01 85.9% 90.3%
2b9lA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 55.0 4.59e-01 89.1% 79.0%
2ou5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 53.0 4.39e-01 89.1% 72.6%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 51.0 4.70e-01 84.8% 89.5%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 53.0 4.17e-01 89.1% 72.4%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 50.0 4.44e-01 82.6% 85.4%
3u5wA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 50.0 4.52e-01 82.6% 84.1%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 50.0 4.47e-01 81.5% 84.1%
3cp3A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 50.0 4.50e-01 82.6% 82.7%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 51.0 4.46e-01 87.0% 86.7%
4ybnB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 52.0 4.05e-01 89.1% 93.7%
2xrcC04 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 50.0 4.04e-01 85.9% 48.9%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 44.0 4.83e-01 80.4% 91.9%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 49.0 4.15e-01 90.2% 80.5%
3nfwA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 52.0 4.20e-01 96.7% 93.9%
5jv4A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 46.0 4.01e-01 83.7% 90.1%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 41.0 4.13e-01 71.7% 76.7%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 44.0 4.21e-01 81.5% 79.0%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.57 45.0 4.32e-01 89.1% 92.8%
1r9fA01 3.30.390.180 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 0.53 43.0 4.08e-01 89.1% 91.7%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.52 38.0 3.58e-01 76.1% 64.9%
1z24A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 37.0 2.98e-01 77.2% 45.0%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
376155 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.87 78.0 5.93e-01 94.6% 45.9%
3066474 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.85 78.0 5.84e-01 97.8% 46.2%
261 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.83 75.0 5.60e-01 96.7% 46.2%
257 1.1.5.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C4 0.82 75.0 5.55e-01 97.8% 41.1%
2779726 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.81 71.0 5.54e-01 98.9% 46.8%
4881914 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 69.0 5.23e-01 92.4% 56.2%
3414359 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 67.0 4.66e-01 90.2% 37.8%
3397446 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 65.0 4.66e-01 90.2% 39.6%
1096110 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.77 66.0 4.90e-01 91.3% 45.8%
3405652 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 66.0 4.73e-01 91.3% 42.4%
None — 0.77 66.0 4.90e-01 91.3% 45.6%
2526961 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.77 66.0 4.86e-01 91.3% 44.8%
3448106 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 71.0 5.06e-01 100.0% 38.8%
None — 0.76 65.0 4.85e-01 91.3% 45.6%
3530898 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.76 70.0 4.86e-01 100.0% 42.1%
5051302 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 64.0 4.70e-01 90.2% 45.8%
140973 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.75 67.0 4.90e-01 98.9% 38.8%
4329871 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 67.0 5.20e-01 96.7% 46.8%
4453816 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 69.0 4.75e-01 100.0% 99.7%
3650249 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 69.0 4.92e-01 98.9% 42.9%
4028467 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 67.0 4.69e-01 96.7% 37.1%
3503641 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 64.0 5.04e-01 92.4% 75.0%
3625701 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.74 62.0 4.42e-01 90.2% 41.9%
None — 0.74 63.0 4.74e-01 91.3% 45.1%
3783835 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.74 68.0 4.78e-01 98.9% 38.1%
134809 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 63.0 4.63e-01 91.3% 44.7%
4525110 1.1.13.65 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Mycop_pep_DUF31 0.74 60.0 5.17e-01 87.0% 97.9%
4073608 1.1.5.57 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.74 65.0 5.20e-01 96.7% 82.8%
3234434 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.73 62.0 4.40e-01 91.3% 41.5%
4995689 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.73 65.0 4.99e-01 97.8% 43.8%
3574288 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 62.0 4.36e-01 91.3% 42.5%
3997886 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 62.0 4.62e-01 91.3% 46.2%
3284072 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.73 66.0 4.84e-01 98.9% 38.9%
4532479 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 62.0 4.49e-01 90.2% 41.7%
3939059 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 61.0 4.25e-01 90.2% 91.6%
3394133 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 61.0 4.52e-01 90.2% 39.1%
3918154 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 62.0 4.24e-01 92.4% 38.3%
3856305 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 61.0 4.42e-01 90.2% 42.3%
4279092 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 61.0 4.35e-01 90.2% 47.6%
3791975 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 61.0 4.29e-01 91.3% 45.9%
3393350 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 58.0 4.43e-01 90.2% 39.0%
4241887 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 61.0 4.33e-01 92.4% 93.6%
1680525 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.71 60.0 4.51e-01 91.3% 49.8%
2129789 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.71 49.0 5.61e-01 71.7% 100.0%
1217153 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 63.0 4.30e-01 96.7% 43.4%
3580932 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.70 60.0 4.19e-01 90.2% 37.4%
4520605 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.70 51.0 4.70e-01 91.3% 58.8%
3246192 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.70 63.0 4.43e-01 97.8% 52.9%
3838513 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.70 62.0 4.60e-01 95.7% 49.6%
3995059 1.1.5.9 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.70 56.0 4.16e-01 85.9% 69.6%
3399484 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.70 60.0 4.40e-01 92.4% 47.4%
3940726 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 62.0 4.36e-01 96.7% 42.6%
3518574 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 64.0 5.29e-01 100.0% 79.4%
3230604 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 63.0 4.46e-01 100.0% 40.4%
3388883 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 60.0 4.34e-01 93.5% 45.4%
1310585 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.69 57.0 4.26e-01 90.2% 38.3%
3991786 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.68 57.0 3.99e-01 90.2% 44.8%
4973387 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.68 53.0 4.61e-01 82.6% 87.1%
5023947 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.68 50.0 4.06e-01 84.8% 41.8%
3225260 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.68 60.0 4.32e-01 97.8% 53.6%
None — 0.68 57.0 4.19e-01 91.3% 42.1%
3393791 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.67 57.0 4.10e-01 91.3% 39.2%
1344807 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.66 56.0 4.19e-01 92.4% 42.0%
163634 1.1.5.30 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_oxase_2 0.66 53.0 4.39e-01 89.1% 72.6%
3960060 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.66 53.0 4.18e-01 85.9% 49.7%
3405914 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.66 55.0 3.95e-01 92.4% 46.9%
4976762 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.66 51.0 4.32e-01 83.7% 87.0%
4019128 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.66 52.0 4.08e-01 84.8% 82.6%
4926888 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.65 51.0 4.60e-01 84.8% 89.2%
3977990 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.65 50.0 4.27e-01 84.8% 83.1%
2095485 1.1.5.38 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C107 0.65 59.0 4.51e-01 100.0% 44.2%
3951474 1.1.5.9 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.65 53.0 4.06e-01 89.1% 68.7%
4963864 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.65 50.0 4.41e-01 82.6% 87.4%
167706 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.65 50.0 4.50e-01 82.6% 82.7%
3527303 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.64 57.0 4.09e-01 98.9% 44.2%
4977763 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.63 49.0 4.21e-01 85.9% 87.7%
3288278 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.61 48.0 4.23e-01 83.7% 80.7%
3953421 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.60 47.0 4.16e-01 85.9% 82.1%
3784334 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.56 28.0 3.40e-01 84.8% 71.7%
3216034 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 44.0 3.69e-01 84.8% 68.0%
3544248 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 44.0 2.85e-01 95.7% 23.5%
3175844 10.12.1.25 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH 0.51 39.0 2.69e-01 82.6% 88.7%
D2 medium residues 93-202
PDB
Domain cluster: rep: ORF1a__YP_009047079__Human_astrovirus_BF34__1518575__D522-618
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00548.27 best Peptidase_C3 26.9 5.90e-06 83.6% 41.0%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.92 77.0 6.29e-01 96.4% 52.8%
1havB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.86 73.0 7.53e-01 88.2% 100.0%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.84 56.0 6.71e-01 86.4% 100.0%
4fvdA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 67.0 7.27e-01 96.4% 100.0%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 72.0 7.46e-01 100.0% 100.0%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 65.0 6.92e-01 94.5% 98.9%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 66.0 6.80e-01 99.1% 100.0%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 66.0 6.69e-01 97.3% 100.0%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 61.0 6.44e-01 90.0% 100.0%
3dfjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 61.0 5.68e-01 91.8% 91.1%
5brrE01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 60.0 5.64e-01 91.8% 91.0%
1boqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 60.0 6.16e-01 90.0% 100.0%
1lvoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 50.0 5.52e-01 94.5% 92.0%
1lvbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 54.0 5.47e-01 90.0% 81.5%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 61.0 6.27e-01 93.6% 100.0%
3f1sB03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 64.0 6.31e-01 100.0% 100.0%
1autC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 58.0 5.45e-01 91.8% 91.0%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 59.0 6.08e-01 97.3% 100.0%
5pabH01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 58.0 5.52e-01 91.8% 90.6%
2j5uA02 2.40.10.340 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 0.67 40.0 4.53e-01 75.5% 77.4%
1mbmA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 41.0 4.74e-01 80.9% 88.2%
1si5H01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 57.0 5.62e-01 94.5% 90.8%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 57.0 5.10e-01 94.5% 91.6%
4bxsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 59.0 5.00e-01 100.0% 96.6%
3u5wA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 53.0 5.09e-01 90.9% 94.4%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.61 33.0 3.58e-01 70.0% 62.6%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.58 46.0 4.12e-01 85.5% 99.4%
2zzeA03 2.40.30.130 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 35.0 3.65e-01 73.6% 69.4%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.54 30.0 3.03e-01 84.5% 53.2%
2q7dA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 41.0 3.38e-01 82.7% 90.0%
1ewqA04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.50 31.0 2.96e-01 87.3% 49.3%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2779726 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.92 78.0 6.31e-01 97.3% 51.6%
261 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.89 83.0 6.50e-01 98.2% 53.8%
376155 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.87 79.0 6.33e-01 100.0% 53.1%
1147338 1.1.5.5 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.80 65.0 5.94e-01 96.4% 66.2%
3066474 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.80 76.0 5.96e-01 100.0% 52.9%
4647114 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.77 71.0 5.43e-01 100.0% 70.8%
4625374 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 70.0 5.44e-01 100.0% 73.9%
3816593 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 70.0 5.51e-01 100.0% 77.3%
3280955 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 69.0 5.41e-01 100.0% 78.7%
3654499 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.74 68.0 6.50e-01 98.2% 86.4%
3510405 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 67.0 5.42e-01 100.0% 67.8%
4882551 1.1.5.5 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.73 68.0 6.04e-01 99.1% 90.6%
3505064 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.73 67.0 4.99e-01 100.0% 81.5%
3960372 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.73 54.0 6.09e-01 90.9% 100.0%
140973 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.72 67.0 5.18e-01 99.1% 70.9%
3694033 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.72 68.0 6.18e-01 100.0% 81.4%
4023336 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.72 67.0 5.29e-01 100.0% 60.5%
3950281 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.72 66.0 5.15e-01 99.1% 51.1%
3507692 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.72 66.0 5.91e-01 100.0% 80.7%
3470154 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 66.0 5.28e-01 100.0% 62.9%
257 1.1.5.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C4 0.72 60.0 4.68e-01 100.0% 44.3%
4014819 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.72 67.0 5.10e-01 99.1% 80.7%
2060704 1.1.5.13 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 0.71 66.0 4.95e-01 100.0% 73.9%
3503044 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.71 64.0 5.33e-01 97.3% 63.8%
3503759 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.71 64.0 4.72e-01 96.4% 78.5%
3509860 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 64.0 4.76e-01 98.2% 75.6%
3576746 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.70 64.0 5.37e-01 100.0% 69.7%
3509500 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.70 64.0 4.74e-01 100.0% 80.7%
3210702 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.70 64.0 4.68e-01 99.1% 87.1%
3504295 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.70 63.0 5.50e-01 97.3% 73.8%
3515391 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 63.0 4.80e-01 99.1% 84.8%
3500586 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.69 63.0 4.71e-01 98.2% 80.0%
3234434 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.69 64.0 4.73e-01 100.0% 86.3%
3504279 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.69 63.0 4.79e-01 100.0% 84.3%
3504078 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 63.0 4.73e-01 100.0% 82.5%
5019852 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.69 63.0 5.01e-01 98.2% 56.2%
3198319 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 63.0 4.44e-01 100.0% 90.7%
3501491 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 62.0 5.75e-01 97.3% 84.4%
3509647 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.68 62.0 4.46e-01 100.0% 67.6%
3216440 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.68 63.0 4.70e-01 100.0% 74.2%
3505835 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.68 61.0 4.64e-01 99.1% 81.6%
2868330 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.67 61.0 4.72e-01 100.0% 83.7%
3502140 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.66 58.0 4.42e-01 95.5% 80.0%
3220497 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.66 61.0 4.79e-01 100.0% 79.5%
3509725 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.66 58.0 4.48e-01 96.4% 70.0%
3244773 1.1.5.49 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.65 58.0 4.35e-01 96.4% 74.6%
3229859 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.65 60.0 4.51e-01 100.0% 80.4%
3907690 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.65 59.0 4.74e-01 100.0% 86.2%
4911687 1.1.5.19 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.59 50.0 4.47e-01 92.7% 77.7%
1099000 1.1.5.19 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.58 51.0 4.23e-01 94.5% 78.9%
3395948 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.57 27.0 3.63e-01 86.4% 87.3%
5000379 284.4.1.0 ↗ a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.56 33.0 3.99e-01 89.1% 91.4%
5036581 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.56 35.0 3.70e-01 74.5% 69.0%
5037456 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.54 37.0 3.40e-01 70.9% 82.1%
2775138 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 34.0 3.13e-01 70.0% 74.2%