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3D

Euk-Vir

Salivirus_NG-J1

3D__YP_003038633__Salivirus_NG-J1__651733

Identity

Accession:
YP_003038633 ↗
Protein ID:
3D
Kingdom:
euk

Quality

94.3 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Salivirus› Salivirus_NG-J1

TaxID: 651733

Cluster

View cluster (450 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 378-467
PDB
Domain cluster: rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481
D2 medium residues 39-89_234-273
PDB
Domain cluster: rep: 3D__NP_740444__Aichi_virus_1__1313215__D51-87_242-280
D3 medium residues 90-200_274-292
PDB
Domain cluster: rep: 3D__YP_009179377__sicinivirus_A1__2773315__D75-149_180-201
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 55.7 5.30e-15 100.0% 26.4%
D4 medium residues 201-233_293-377
PDB
Domain cluster: rep: RNA_dependent_RNA_polymerase__YP_529897__Newbury_agent_1__331642__D58-79_192-241_281-399
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 38.9 6.50e-10 75.4% 19.8%