3D

Euk-Vir

Pigeon_picornavirus_B

3D__YP_004564619__Pigeon_picornavirus_B__928289

Identity

93.5 mean pLDDT

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Pigeon_picornavirus_B

TaxID: 928289

View cluster (450 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-52

PDB

Domain cluster: rep: RNA-directed_RNA_polymerase__NP_740478__Enterovirus_C__138950__D2-59

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
None	—		0.85	75.0	4.43e-01	100.0%	15.0%
2541763	304.48.1.8 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1	0.82	72.0	4.28e-01	100.0%	13.9%

D2 high residues 369-455

PDB

Domain cluster: rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481

D3 medium residues 91-155_174-200_263-282

PDB

Domain cluster: rep: 3D__YP_009179377__sicinivirus_A1__2773315__D75-149_180-201

D4 medium residues 201-262_283-368

PDB

Domain cluster: rep: RNA_dependent_RNA_polymerase__YP_529897__Newbury_agent_1__331642__D58-79_192-241_281-399

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	28.5	9.10e-07	58.8%	20.4%
PF00680.26	RdRP_1	27.9	1.40e-06	38.5%	11.6%