3D

Euk-Vir

Chicken_picornavirus_1

3D__YP_009055003__Chicken_picornavirus_1__1534544

Identity

94.6 mean pLDDT

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Chicken_picornavirus_1

TaxID: 1534544

View cluster (450 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 383-471

PDB

Domain cluster: rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481

D2 medium residues 1-61

PDB

Domain cluster: rep: RNA-directed_RNA_polymerase__NP_740478__Enterovirus_C__138950__D2-59

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2541763	304.48.1.8 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1	0.95	90.0	5.31e-01	100.0%	16.3%
None	—		0.83	74.0	4.53e-01	100.0%	17.8%

D3 medium residues 62-201_238-298

PDB

Domain cluster: rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	61.0	1.30e-16	65.2%	26.7%

D4 medium residues 202-237_299-382

PDB

Domain cluster: rep: RNA_dependent_RNA_polymerase__YP_529897__Newbury_agent_1__331642__D58-79_192-241_281-399

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	38.9	6.70e-10	70.8%	19.8%