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3D

Euk-Vir

Chicken_picornavirus_2

3D__YP_009055013__Chicken_picornavirus_2__1534545

Identity

Accession:
YP_009055013 ↗
Protein ID:
3D
Kingdom:
euk

Quality

92.6 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Avisivirus› avisivirus_B1

TaxID: 1534545

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 369-447
PDB
Domain cluster: rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481
D2 medium residues 1-64
PDB
Domain cluster: rep: 3D_protein__YP_008119844__Sebokele_virus_1__1294177__D1-65
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bsoA02 6.10.250.3230 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 48.0 5.00e-01 78.1% 94.7%
D3 medium residues 65-193_226-284
PDB
Domain cluster: rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 47.4 1.70e-12 64.4% 22.4%
D4 medium residues 194-225_285-368
PDB
Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 25.6 7.20e-06 75.0% 20.7%