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3D

Euk-Vir

Kobuvirus_cattle_Kagoshima-2-24-KoV_2015_JPN

3D__YP_009167357__Kobuvirus_cattle_Kagoshima-2-24-KoV_2015_JPN__1659219

Identity

Accession:
YP_009167357 ↗
Protein ID:
3D
Kingdom:
euk

Quality

94.2 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Kobuvirus› Kobuvirus_cattle/Kagoshima-2-24-KoV/2015/JPN

TaxID: 1659219

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 395-473
PDB
Domain cluster: rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481
D2 medium residues 1-209_247-298
PDB
Domain cluster: rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 60.4 2.00e-16 75.1% 42.7%
D3 medium residues 210-246_299-394
PDB
Domain cluster: rep: RNA_dependent_RNA_polymerase__YP_529897__Newbury_agent_1__331642__D58-79_192-241_281-399
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 45.9 5.00e-12 72.2% 21.3%