3D_protein

Euk-Vir

Sebokele_virus_1

3D_protein__YP_008119844__Sebokele_virus_1__1294177

Identity

95.8 mean pLDDT

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Picornaviridae› Parechovirus› parechovirus_C1

TaxID: 1294177

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 384-469

PDB

Domain cluster: rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481

D2 medium residues 1-65

PDB

Domain cluster: representative

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
None	—		0.79	72.0	4.41e-01	100.0%	18.0%
2541763	304.48.1.8 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1	0.74	66.0	4.06e-01	98.5%	94.9%

D3 medium residues 66-210_245-301

PDB

Domain cluster: rep: RNA-dependent_RNA-polymerase_-RdRp-__YP_004429254__Grapevine_Bulgarian_latent_virus__748667__D66-229_264-320

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	60.5	1.90e-16	71.3%	26.7%
PF00680.26	RdRP_1	32.5	5.60e-08	29.7%	14.0%

D4 medium residues 211-244_302-380

PDB

Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	39.6	4.00e-10	71.7%	19.3%