41_kDa_glycoprotein

Euk-Vir

Pseudoplusia_includens_SNPV_IE

41_kDa_glycoprotein__YP_009116989__Pseudoplusia_includens_SNPV_IE__1592335

Identity

68.2 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Pseudoplusia_includens_SNPV_IE

TaxID: 1592335

View cluster (31 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-74

PDB

D2 medium residues 75-156

PDB

Domain cluster: rep: GP41__YP_009666427__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D208-272

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04700.18 best	Baculo_gp41	96.4	2.60e-27	100.0%	41.9%

D3 medium residues 160-263

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04700.18 best	Baculo_gp41	119.6	2.00e-34	100.0%	53.2%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2mxdA00	1.10.260.110	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) ›	0.64	29.0	3.62e-01	80.8%	67.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
None	—		0.59	43.0	3.20e-01	76.9%	44.0%
4992004	192.7.1.0 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm	0.54	31.0	3.28e-01	72.1%	61.1%
3627314	109.4.1.17 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin	0.51	45.0	2.96e-01	100.0%	42.7%