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47L_protein

Euk-Vir

Yaba-like_disease_virus

47L_protein__NP_073432__Yaba-like_disease_virus__132475

Identity

Accession:
NP_073432 ↗
Protein ID:
47L_protein
Kingdom:
euk

Quality

73.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Yatapoxvirus› Yaba-like_disease_virus

TaxID: 132475

Cluster

View cluster (29 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-149
PDB
Domain cluster: rep: hypothetical_protein_YMTVg47L__NP_938302__Yaba_monkey_tumor_virus__38804__D22-149
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04595.19 best Pox_I6 159.9 1.10e-46 96.8% 37.2%
D2 high residues 159-259
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04595.19 best Pox_I6 133.9 8.80e-39 100.0% 30.9%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.77 45.0 4.53e-01 70.3% 57.8%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 45.0 4.29e-01 89.1% 57.4%
1ewqB01 3.40.1170.10 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I 0.64 44.0 4.23e-01 72.3% 71.2%
6r2nA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 45.0 4.06e-01 74.3% 92.9%
4ydsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 45.0 3.48e-01 76.2% 81.0%
4fgmA01 2.60.40.3650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 3.70e-01 78.2% 93.0%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 41.0 3.97e-01 100.0% 66.4%
3nroA00 3.40.630.190 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein 0.56 50.0 3.79e-01 99.0% 93.2%
4ifeA02 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.55 47.0 3.64e-01 93.1% 85.5%
3f6gA02 3.30.160.340 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 33.0 4.03e-01 86.1% 96.8%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 4.16e-01 100.0% 84.7%
3q0xA01 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.53 44.0 3.86e-01 91.1% 84.5%
2og9A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 44.0 4.07e-01 89.1% 81.5%
5xd7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 44.0 4.12e-01 90.1% 89.0%
1nbwA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 44.0 4.05e-01 91.1% 87.9%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 31.0 3.47e-01 74.3% 76.0%
3o6uC00 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.51 35.0 3.40e-01 72.3% 87.4%
4hjhA02 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.51 36.0 3.89e-01 74.3% 98.8%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 34.0 2.43e-01 90.1% 21.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4884047 2003.1.9.10 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF, E1_FCCH 0.66 34.0 2.93e-01 75.2% 32.0%
3246370 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 46.0 3.24e-01 75.2% 36.3%
4947372 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 45.0 4.40e-01 72.3% 96.4%
3427901 2484.1.1.215 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.64 47.0 3.63e-01 77.2% 48.4%
5002261 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 46.0 3.53e-01 76.2% 70.4%
4979275 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 45.0 3.44e-01 75.2% 83.3%
3457175 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 47.0 3.46e-01 78.2% 38.5%
5077271 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.63 46.0 3.51e-01 76.2% 83.0%
5031865 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.62 45.0 3.47e-01 76.2% 86.7%
4943055 2004.1.1.1219 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7504 0.61 44.0 3.42e-01 74.3% 85.9%
5054128 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 44.0 4.25e-01 100.0% 68.7%
3708804 2484.1.1.167 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CHAT 0.59 44.0 3.67e-01 78.2% 89.7%
3586348 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 52.0 3.48e-01 95.0% 97.8%
3627926 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.59 42.0 3.83e-01 74.3% 65.2%
4944090 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 42.0 4.11e-01 74.3% 94.5%
3899311 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 51.0 3.29e-01 96.0% 93.2%
4937132 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 41.0 3.41e-01 74.3% 74.5%
3925834 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 39.0 3.42e-01 71.3% 76.8%
3628252 2484.1.1.50 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.57 50.0 3.32e-01 95.0% 96.5%
5050681 4143.1.1.0 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like 0.56 40.0 3.51e-01 73.3% 66.7%
3591211 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 28.0 3.13e-01 72.3% 58.7%
3917748 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 40.0 3.58e-01 74.3% 89.7%
4449302 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 38.0 3.81e-01 100.0% 68.6%
3350247 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.55 43.0 3.87e-01 100.0% 59.3%
3610887 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 42.0 4.03e-01 100.0% 71.3%
4230708 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.54 41.0 3.75e-01 86.1% 59.3%
3673251 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.54 44.0 3.71e-01 100.0% 51.4%
3367063 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.54 43.0 3.28e-01 100.0% 36.3%
3913349 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 47.0 3.07e-01 95.0% 87.9%
3649749 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.54 43.0 3.42e-01 100.0% 40.2%
4830163 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.54 38.0 3.34e-01 76.2% 63.3%
3262463 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.53 40.0 3.60e-01 100.0% 57.1%
4077054 3518.1.1.1 ↗ a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind 0.53 37.0 3.63e-01 73.3% 90.4%
4456679 3234.1.1.2 ↗ a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N 0.53 38.0 2.75e-01 75.2% 45.5%
3674460 2484.1.1.157 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.53 45.0 3.43e-01 92.1% 51.6%
3944257 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 46.0 4.28e-01 98.0% 100.0%
4026722 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.52 39.0 3.57e-01 100.0% 57.9%
3698880 2003.1.9.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.52 38.0 2.72e-01 76.2% 49.2%
140198 3518.1.1.1 ↗ a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind 0.52 36.0 3.50e-01 74.3% 87.7%
3654791 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.52 40.0 3.60e-01 100.0% 58.6%
3468750 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 36.0 2.97e-01 72.3% 42.6%
4463884 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.52 41.0 3.94e-01 85.1% 86.1%
1874314 2003.1.9.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.51 37.0 3.24e-01 76.2% 85.5%
3936025 2.1.1.25 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.51 41.0 4.14e-01 100.0% 89.0%
146266 295.1.1.8 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 0.51 31.0 3.34e-01 74.3% 70.2%
3830552 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 40.0 3.65e-01 100.0% 61.4%
2082815 2003.1.9.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF, E1_4HB 0.51 37.0 3.17e-01 76.2% 84.2%
3425164 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.51 35.0 2.82e-01 72.3% 37.8%
3940677 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.50 36.0 2.97e-01 75.2% 44.6%
3537881 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.50 43.0 3.76e-01 100.0% 84.2%
D3 high residues 277-381
PDB